RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, human

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-213	ENST00000485530		H3BM21	787 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	TPP1	O14773	563 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	CASC3	O15234	703 aa	Known RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	NOBOX	O60393	691 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	NIPSNAP2	O75323	286 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	FAM155B	O75949	473 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	DKK1	O94907	266 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	GSTA2	P09210	222 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	RALB	P11234	206 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	PLA2G2A	P14555	144 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	RPS3	P23396	243 aa	Known RBP eCLIP	12	□□□□□ -0.49	1e-7	■□□□□ 9
TRA2B-213	ENST00000485530	PDHA2	P29803	388 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	PBLD	P30039	288 aa	Predicted RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	CCR7	P32248	378 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	ACTR1B	P42025	376 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	CLCNKA	P51800	687 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	ADAR	P55265	1226 aa	Known RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	EIF3B	P55884	814 aa	Known RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	ACTR1A	P61163	376 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	DMPK	Q09013	629 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	GTF2H3	Q13889	308 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	LRP8	Q14114	963 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	CLCA4	Q14CN2	919 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12	□□□□□ -0.49	3e-23	■■■■□ 21.5
TRA2B-213	ENST00000485530	ELOC	Q15369	112 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	KBTBD12	Q3ZCT8	623 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	AARS2	Q5JTZ9	985 aa	Known RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	METRNL	Q641Q3	311 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	WDR93	Q6P2C0	686 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	LVRN	Q6Q4G3	990 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	AMZ2	Q86W34	360 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	MARCH9	Q86YJ5	346 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	LMNTD2	Q8IXW0	634 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	CFAP206	Q8IYR0	622 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	NAGS	Q8N159	534 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	FSTL5	Q8N475	847 aa	Predicted RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	OR2L2	Q8NH16	312 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	OR4C6	Q8NH72	309 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	UHMK1	Q8TAS1	419 aa	Known RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	BAHD1	Q8TBE0	780 aa	Predicted RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	SLC39A7	Q92504	469 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12	□□□□□ -0.49	1e-6	■■■■□ 24.5
TRA2B-213	ENST00000485530	ZNF514	Q96K75	400 aa	Predicted RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	SLC30A3	Q99726	388 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	TIMM29	Q9BSF4	260 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	FAM167B	Q9BTA0	163 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	FUT8	Q9BYC5	575 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	VPS37B	Q9H9H4	285 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	INTS10	Q9NVR2	710 aa	Known RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	CDYL	Q9Y232	598 aa		12	□□□□□ -0.49
TRA2B-213	ENST00000485530	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12	□□□□□ -0.49
TRA2B-213	ENST00000485530	C17orf113	A0A1B0GUU1	675 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	UBA6	A0AVT1	1052 aa	Predicted RBP	11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	NEMP2	A6NFY4	417 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	TK2	O00142	265 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	YKT6	O15498	198 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	SNX2	O60749	519 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	ACSL3	O95573	720 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	ANXA6	P08133	673 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	PKM	P14618	531 aa	Known RBP	11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	RPL10	P27635	214 aa	Known RBP	11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	AOAH	P28039	575 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	CDKN2D	P55273	166 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	CYP4F3	Q08477	520 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	ILF3	Q12906	894 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	SUZ12	Q15022	739 aa	Known RBP	11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	BRD3	Q15059	726 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	INSC	Q1MX18	579 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	PROX2	Q3B8N5	592 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	RBM20	Q5T481	1227 aa	Known RBP	11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	IYD	Q6PHW0	289 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	STRA8	Q7Z7C7	330 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	C17orf82	Q86X59	251 aa	Predicted RBP	11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	GKN2	Q86XP6	184 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	VRK3	Q8IV63	474 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	SLC35F3	Q8IY50	421 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	SDR16C5	Q8N3Y7	309 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	GPR156	Q8NFN8	814 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	CALML6	Q8TD86	181 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	RHBDD1	Q8TEB9	315 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	SETD7	Q8WTS6	366 aa	Known RBP	11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	FAM136A	Q96C01	138 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	APOLD1	Q96LR9	279 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	NDN	Q99608	321 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	TTC1	Q99614	292 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	GSDMC	Q9BYG8	508 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	TSPYL1	Q9H0U9	437 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	DPEP2	Q9H4A9	486 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	NLGN3	Q9NZ94	848 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	FAM8A1	Q9UBU6	413 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	RAB21	Q9UL25	225 aa		11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	TP53BP1	Q12888	1972 aa	Predicted RBP	11.99	□□□□□ -0.49
TRA2B-213	ENST00000485530	SLC5A10	A0PJK1	596 aa		11.98	□□□□□ -0.49
TRA2B-213	ENST00000485530	HMX2	A2RU54	273 aa		11.98	□□□□□ -0.49
TRA2B-213	ENST00000485530	ATXN7	O15265	892 aa	Predicted RBP	11.98	□□□□□ -0.49
TRA2B-213	ENST00000485530	RIPK2	O43353	540 aa		11.98	□□□□□ -0.49
TRA2B-213	ENST00000485530	OR56A5	P0C7T3	313 aa		11.98	□□□□□ -0.49
TRA2B-213	ENST00000485530	PPARG	P37231	505 aa	Predicted RBP	11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms