RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 RASSF9O75901 435 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 RHOBTB3O94955 611 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 PIGNO95427 931 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 EML2O95834 649 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 CPP00450 1065 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 ANKRD34CP0C6C1 535 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 FGF5P12034 268 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 MYCLP1P12525 358 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-210ENST00000485247 GTF2H1P32780 548 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 CA5AP35218 305 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 MMP12P39900 470 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 GPD2P43304 727 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 RPL34P49207 117 aaKnown RBP5.25□□□□□ -1.57
PTPN4-210ENST00000485247 RRADP55042 308 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 KCNK10P57789 538 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 PDE1BQ01064 536 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 MTA1Q13330 715 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 STILQ15468 1287 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 CBWD6Q4V339 395 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 CBWD3Q5JTY5 395 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 CBWD5Q5RIA9 395 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-210ENST00000485247 CFAP58Q5T655 872 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 PWWP2BQ6NUJ5 590 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 ERAP2Q6P179 960 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 ETV3LQ6ZN32 361 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 Q6ZS92 163 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 MED25Q71SY5 747 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 PRIMA1Q86XR5 153 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 ZGRF1Q86YA3 2104 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 PLXDC1Q8IUK5 500 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 CARFQ8N187 725 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 SFRP1Q8N474 314 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 ZADH2Q8N4Q0 377 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 ARFGAP1Q8N6T3 406 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 UBR7Q8N806 425 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 LINC00482Q8N8I6 264 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 IQUBQ8NA54 791 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 FAR1Q8WVX9 515 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 MR1Q95460 341 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 SGSM3Q96HU1 749 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 C9orf72Q96LT7 481 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 GDAP1L1Q96MZ0 367 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 TGM7Q96PF1 710 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 TRAPPC9Q96Q05 1148 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 NCAPGQ9BPX3 1015 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 TBC1D10AQ9BXI6 508 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 WDCPQ9H6R7 721 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 ZBTB20Q9HC78 741 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-210ENST00000485247 PIGVQ9NUD9 493 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 ZNF212Q9UDV6 495 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 SNX7Q9UNH6 387 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 CSAG2Q9Y5P2 127 aa5.25□□□□□ -1.57
PTPN4-210ENST00000485247 PRRC2AP48634 2157 aaKnown RBP5.25□□□□□ -1.57
PTPN4-210ENST00000485247 RTTNQ86VV8 2226 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 IGLV3-10A0A075B6K4 115 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 TRGV8A0A0C4DH27 118 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 GOLGA6CA6NDK9 693 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 GOLGA6BA6NDN3 693 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 CCL21O00585 134 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 JRKO75564 520 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 TMCC1O94876 653 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 IGSF6O95976 241 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 ALPPP05187 535 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 ELFN1P0C7U0 828 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 GOLGA6DP0CG33 693 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 TYRP1P17643 537 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 PSMC2P35998 433 aaKnown RBP5.24□□□□□ -1.57
PTPN4-210ENST00000485247 SUOXP51687 545 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 VAV2P52735 878 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 GEMIN4P57678 1058 aaKnown RBP5.24□□□□□ -1.57
PTPN4-210ENST00000485247 KRTAP10-2P60368 255 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 RHOAP61586 193 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 CDK3Q00526 305 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 Q0VFX4 171 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 FOXD4Q12950 439 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-210ENST00000485247 RALGDSQ12967 914 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 ATP1A4Q13733 1029 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 ACOX1Q15067 660 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 ASIC2Q16515 512 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 DCAF10Q5QP82 559 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 MROH9Q5TGP6 573 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 DENND1BQ6P3S1 775 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 DOK6Q6PKX4 331 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 IGFL3Q6UXB1 125 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 TMEM110Q86TL2 294 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 GRAMD1CQ8IYS0 662 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 ZBTB2Q8N680 514 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 CHDHQ8NE62 594 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-210ENST00000485247 TM9SF4Q92544 642 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 ZBTB8AQ96BR9 441 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 EXOC2Q96KP1 924 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 CCDC140Q96MF4 163 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 SLC2A13Q96QE2 648 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 SMR3AQ99954 134 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 FRMD8Q9BZ67 464 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-210ENST00000485247 TTYH3Q9C0H2 523 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 STN1Q9H668 368 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms