RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	SYF2	O95926	243 aa	Known RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	CYP1A2	P05177	515 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	NGFR	P08138	427 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	NAGA	P17050	411 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	PTAFR	P25105	342 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	HNRNPH1	P31943	449 aa	Known RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	STX2	P32856	288 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	KRT2	P35908	639 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	SUOX	P51687	545 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	IL11RA	Q14626	422 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	LETM2	Q2VYF4	491 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	MMEL1	Q495T6	779 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	KRBOX4	Q5JUW0	171 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	DNTTIP2	Q5QJE6	756 aa	Known RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	WASHC2D	Q5SRD0	308 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	ZDHHC20	Q5W0Z9	365 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	RBPMS2	Q6ZRY4	209 aa	Known RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	GPSM1	Q86YR5	675 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	MFN1	Q8IWA4	741 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	XXYLT1	Q8NBI6	393 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	ENGASE	Q8NFI3	743 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	ERLEC1	Q96DZ1	483 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	PPP1R13B	Q96KQ4	1090 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	EGLN2	Q96KS0	407 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	CDRT15	Q96T59	188 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	SLX1A	Q9BQ83	275 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	KXD1	Q9BQD3	176 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	FERMT1	Q9BQL6	677 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	NUP85	Q9BW27	656 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	ESRP2	Q9H6T0	727 aa	Known RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	C17orf75	Q9HAS0	396 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	MBNL1	Q9NR56	388 aa	Known RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	ZBTB40	Q9NUA8	1239 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	ABCF3	Q9NUQ8	709 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	MRGBP	Q9NV56	204 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	PAG1	Q9NWQ8	432 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	C5AR2	Q9P296	337 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	LARS	Q9P2J5	1176 aa	Known RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	WDR35	Q9P2L0	1181 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	CRNN	Q9UBG3	495 aa	Predicted RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	IGSF1	Q8N6C5	1336 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	ZNF541	Q9H0D2	1346 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	TMEM2	Q9UHN6	1383 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024		H0Y626	953 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	NDUFS4	O43181	175 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	STX6	O43752	255 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	PSMD10	O75832	226 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	GAGE7	O76087	117 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	CAMTA2	O94983	1202 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	TRUB2	O95900	331 aa	Known RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	EGF	P01133	1207 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	ICAM1	P05362	532 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	LINGO3	P0C6S8	592 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	GAGE12F	P0CL80	117 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	GAGE12G	P0CL81	117 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	GAGE12I	P0CL82	117 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	PFKFB1	P16118	471 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	MUT	P22033	750 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	PCGF2	P35227	344 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	RPL3	P39023	403 aa	Known RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	TNNT3	P45378	269 aa	Predicted RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	SELENOV	P59797	346 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	PPARD	Q03181	441 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	SCN1B	Q07699	218 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	TRAF2	Q12933	501 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	GAGE1	Q13065	139 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	GAGE2B	Q13066	116 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	GAGE4	Q13068	117 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	CAMK2D	Q13557	499 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	GPR18	Q14330	331 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	PTPRCAP	Q14761	206 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	MVP	Q14764	893 aa	Known RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	NR1D2	Q14995	579 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	GAGE2E	Q4V326	116 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	FSCB	Q5H9T9	825 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	EFHC1	Q5JVL4	640 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	KRT39	Q6A163	491 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	CAPRIN2	Q6IMN6	1127 aa	Known RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	GAGE2A	Q6NT46	116 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	FAM122C	Q6P4D5	195 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	DENND5B	Q6ZUT9	1274 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	LDB1	Q86U70	411 aa	Predicted RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	AADAT	Q8N5Z0	425 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	EXD1	Q8NHP7	514 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	ARRDC2	Q8TBH0	407 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	HM13	Q8TCT9	377 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	MRPS27	Q92552	414 aa	Known RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	SECISBP2L	Q93073	1101 aa	Known RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	TAAR8	Q969N4	342 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	ERGIC1	Q969X5	290 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	SPACA9	Q96E40	222 aa	Predicted RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	ERO1A	Q96HE7	468 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	CAPNS2	Q96L46	248 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	NLRP4	Q96MN2	994 aa		3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	JAKMIP1	Q96N16	626 aa	Known RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	NAA11	Q9BSU3	229 aa	Predicted RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	MOV10L1	Q9BXT6	1211 aa	Known RBP	3.84	□□□□□ -1.79
VPS8-223	ENST00000485024	PIGM	Q9H3S5	423 aa		3.84	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms