RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ZNF470Q6ECI4 717 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 CAPRIN2Q6IMN6 1127 aaKnown RBP20.46■□□□□ 0.87
SEC13-217ENST00000482647 C8orf74Q6P047 294 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 IGDCC3Q8IVU1 814 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 LILRA3Q8N6C8 439 aaPredicted RBP20.46■□□□□ 0.87
SEC13-217ENST00000482647 CALML6Q8TD86 181 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 C12orf66Q96MD2 445 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 TMEM74Q96NL1 305 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 INSM2Q96T92 566 aaPredicted RBP20.46■□□□□ 0.87
SEC13-217ENST00000482647 DPYSL5Q9BPU6 564 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 CARD6Q9BX69 1037 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 P2RY12Q9H244 342 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 EPB41L1Q9H4G0 881 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 IMP3Q9NV31 184 aaKnown RBP20.46■□□□□ 0.87
SEC13-217ENST00000482647 IL1RAPL1Q9NZN1 696 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 ZC3H7BQ9UGR2 993 aaKnown RBP20.46■□□□□ 0.87
SEC13-217ENST00000482647 HEBP2Q9Y5Z4 205 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 RP1P56715 2156 aa20.46■□□□□ 0.87
SEC13-217ENST00000482647 UBA6A0AVT1 1052 aaPredicted RBP20.45■□□□□ 0.86
SEC13-217ENST00000482647 CTAGE15A4D2H0 777 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 TRABD2BA6NFA1 517 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 LILRA5A6NI73 299 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 IFRD1O00458 451 aaPredicted RBP20.45■□□□□ 0.86
SEC13-217ENST00000482647 DUX1O43812 170 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 CTAGE8P0CG41 777 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 ELK3P41970 407 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 ADARP55265 1226 aaKnown RBP20.45■□□□□ 0.86
SEC13-217ENST00000482647 EIF3BP55884 814 aaKnown RBP20.45■□□□□ 0.86
SEC13-217ENST00000482647 CAV1Q03135 178 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 CRYMQ14894 314 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 SYTL3Q4VX76 610 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 HP1BP3Q5SSJ5 553 aaPredicted RBP20.45■□□□□ 0.86
SEC13-217ENST00000482647 CTAGE6Q86UF2 777 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 CTAGE4Q8IX94 777 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 SPDYE1Q8NFV5 336 aaPredicted RBP20.45■□□□□ 0.86
SEC13-217ENST00000482647 GABPB2Q8TAK5 448 aaPredicted RBP20.45■□□□□ 0.86
SEC13-217ENST00000482647 ZFPM2Q8WW38 1151 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 LPGAT1Q92604 370 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 FAM167BQ9BTA0 163 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 LRRC1Q9BTT6 524 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 OR52A5Q9H2C5 316 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 RDH14Q9HBH5 336 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 INTS10Q9NVR2 710 aaKnown RBP20.45■□□□□ 0.86
SEC13-217ENST00000482647 PCDHB1Q9Y5F3 818 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 CFAP20Q9Y6A4 193 aaKnown RBP20.45■□□□□ 0.86
SEC13-217ENST00000482647 TEX264Q9Y6I9 313 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 COLEC10Q9Y6Z7 277 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 AKAP13Q12802 2813 aa20.45■□□□□ 0.86
SEC13-217ENST00000482647 H3BMM5 538 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 ESR1P03372 595 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 ITGB6P18564 788 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 FMO4P31512 558 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 MAPK9P45984 424 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 PREPP48147 710 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 INHBCP55103 352 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 PDIA2Q13087 525 aaKnown RBP20.44■□□□□ 0.86
SEC13-217ENST00000482647 CBLBQ13191 982 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 BOP1Q14137 746 aaKnown RBP20.44■□□□□ 0.86
SEC13-217ENST00000482647 GPR18Q14330 331 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 KRT33BQ14525 404 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 HSP90AA5PQ58FG0 334 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 CENPUQ71F23 418 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 ASZ1Q8WWH4 475 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 GATA6Q92908 595 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 ATXN7L3BQ96GX2 97 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 RMDN2Q96LZ7 410 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 PANX3Q96QZ0 392 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 TBC1D10AQ9BXI6 508 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 FOXP3Q9BZS1 431 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 STRADBQ9C0K7 418 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 NRSN2Q9GZP1 204 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 ZMYND15Q9H091 742 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 GRHL1Q9NZI5 618 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 CHMP2BQ9UQN3 213 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 ENTPD2Q9Y5L3 495 aa20.44■□□□□ 0.86
SEC13-217ENST00000482647 PRAMEF33A0A0G2JMD5 474 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 IQCF5A8MTL0 148 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 E7ESA3 106 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 S1PR4O95977 384 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 NDUFS1P28331 727 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 PDHA2P29803 388 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 CCKBRP32239 447 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 CCR7P32248 378 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 PDX1P52945 283 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 ZFP36L1Q07352 338 aaKnown RBP20.43■□□□□ 0.86
SEC13-217ENST00000482647 CTBP1Q13363 440 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 BRD3Q15059 726 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 WDR74Q6RFH5 385 aaPredicted RBP20.43■□□□□ 0.86
SEC13-217ENST00000482647 UNC5AQ6ZN44 842 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 B3GNT8Q7Z7M8 397 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 KCNMB4Q86W47 210 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 MMGT1Q8N4V1 131 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 OR4D9Q8NGE8 314 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 ART4Q93070 314 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 TMEM159Q96B96 161 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 CFAP36Q96G28 342 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 BIRC8Q96P09 236 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 NUDT22Q9BRQ3 303 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 IARS2Q9NSE4 1012 aaKnown RBP20.43■□□□□ 0.86
SEC13-217ENST00000482647 CRYL1Q9Y2S2 319 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms