RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 UGT8Q16880 541 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 FAM83EQ2M2I3 478 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 TRMT5Q32P41 509 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 C5orf22Q49AR2 442 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 CCDC157Q569K6 752 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 CLLU1OSQ5K130 101 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 SH2D4BQ5SQS7 431 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 CERCAMQ5T4B2 595 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 SNX30Q5VWJ9 437 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 LIPMQ5VYY2 423 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 MBNL2Q5VZF2 373 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 ZYG11AQ6WRX3 759 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 DBX2Q6ZNG2 339 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 RAPH1Q70E73 1250 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 NET1Q7Z628 596 aaPredicted RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 MILR1Q7Z6M3 343 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 RTN4RL1Q86UN2 441 aaPredicted RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 MOGAT3Q86VF5 341 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 ZC3HC1Q86WB0 502 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 CPOQ8IVL8 374 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 MFN1Q8IWA4 741 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 CARNMT1Q8N4J0 409 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 NAT16Q8N8M0 369 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 IPMKQ8NFU5 416 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 OR10H5Q8NGA6 315 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 SPPL3Q8TCT6 385 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 AGAP11Q8TF27 550 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 STMN2Q93045 179 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 THOC1Q96FV9 657 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 IMP4Q96G21 291 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 CELF6Q96J87 481 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 MRPL57Q9BQC6 102 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 FICDQ9BVA6 458 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 ZMAT4Q9H898 229 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 BATF3Q9NR55 127 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 CHRAC1Q9NRG0 131 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 IARS2Q9NSE4 1012 aaKnown RBP7.67□□□□□ -1.18
SNX13-208ENST00000482558 TREX1Q9NSU2 369 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 CATSPERZQ9NTU4 200 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 AP5S1Q9NUS5 200 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.67□□□□□ -1.18
SNX13-208ENST00000482558 RNF186Q9NXI6 227 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 MARCH2Q9P0N8 246 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 CACNG4Q9UBN1 327 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 STK39Q9UEW8 545 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 BCAP29Q9UHQ4 241 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 SLC39A10Q9ULF5 831 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 DNAJC16Q9Y2G8 782 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 RAP2CQ9Y3L5 183 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 PSAT1Q9Y617 370 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 THSD7BQ9C0I4 1608 aa7.67□□□□□ -1.18
SNX13-208ENST00000482558 FRMPD3Q5JV73 1810 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 FNDC1Q4ZHG4 1894 aaPredicted RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 LCHNA4D1U4 455 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 TRPC5OSA6NMA1 111 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 TRIM38O00635 465 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 PFDN6O15212 129 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 PHGDHO43175 533 aaKnown RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 NPHS1O60500 1241 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 RAMP2O60895 175 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 USP12O75317 370 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 ANP32DO95626 131 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 ESR1P03372 595 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 FGF1P05230 155 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 ITGB1P05556 798 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 ZDHHC11BP0C7U3 371 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 HAPLN1P10915 354 aaPredicted RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 IGFBP6P24592 240 aaPredicted RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 PGM1P36871 562 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 LEPRP48357 1165 aaKnown RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 ARCN1P48444 511 aaKnown RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 SLC11A2P49281 568 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 CASP6P55212 293 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 WNT3AP56704 352 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 RAB1AP62820 205 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 IRX4P78413 519 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 CREMQ03060 361 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 MSLNQ13421 630 aaPredicted RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 TIGD6Q17RP2 521 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.66□□□□□ -1.18
SNX13-208ENST00000482558 MS4A13Q5J8X5 152 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 RTP2Q5QGT7 225 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 RABGAP1LQ5R372 815 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 FAM171A1Q5VUB5 890 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 NEPROQ6NW34 567 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 KDELC1Q6UW63 502 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 PIWIL4Q7Z3Z4 852 aaKnown RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 ZNF280BQ86YH2 543 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 SLC22A9Q8IVM8 553 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 C10orf107Q8IVU9 208 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 ZNF683Q8IZ20 524 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 HASPINQ8TF76 798 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 STYXQ8WUJ0 223 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 FEM1CQ96JP0 617 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 NUDCD1Q96RS6 583 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 TMEM209Q96SK2 561 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 TTPALQ9BTX7 342 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 TRMOQ9BU70 441 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 CCDC28BQ9BUN5 200 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms