RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 WWP1Q9H0M0 922 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 RHOJQ9H4E5 214 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 DNAAF2Q9NVR5 837 aaKnown RBP12.98□□□□□ -0.33
HDAC1-208ENST00000482310 CTNNAL1Q9UBT7 734 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 SLC39A10Q9ULF5 831 aa12.98□□□□□ -0.33
HDAC1-208ENST00000482310 RUVBL2Q9Y230 463 aaKnown RBP12.98□□□□□ -0.33
HDAC1-208ENST00000482310 LMO7DNF2Z398 122 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 H3BMM5 538 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 IDSP22304 550 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 PDHA2P29803 388 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 SPRP35270 261 aaPredicted RBP12.97□□□□□ -0.33
HDAC1-208ENST00000482310 GMPRP36959 345 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 MAZP56270 477 aaKnown RBP12.97□□□□□ -0.33
HDAC1-208ENST00000482310 IFFO1Q0D2I5 559 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
HDAC1-208ENST00000482310 USP10Q14694 798 aaKnown RBP12.97□□□□□ -0.33
HDAC1-208ENST00000482310 TMED2Q15363 201 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 GRTP1Q5TC63 336 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 STPG1Q5TH74 334 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 FAM45BPQ6NSW5 357 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 CYS1Q717R9 158 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 KANSL1Q7Z3B3 1105 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 GALNT7Q86SF2 657 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 VRK3Q8IV63 474 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 CPNE9Q8IYJ1 553 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 ZBTB2Q8N680 514 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 KYQ8NBH2 561 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
HDAC1-208ENST00000482310 CFAP61Q8NHU2 1237 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 GIMAP7Q8NHV1 300 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 FAM45AQ8TCE6 357 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 SLC44A1Q8WWI5 657 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 SCG3Q8WXD2 468 aaKnown RBP12.97□□□□□ -0.33
HDAC1-208ENST00000482310 TMEM159Q96B96 161 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 UNKQ9C0B0 810 aaKnown RBP12.97□□□□□ -0.33
HDAC1-208ENST00000482310 DLL3Q9NYJ7 618 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 SCHIP1Q9P0W5 487 aaPredicted RBP12.97□□□□□ -0.33
HDAC1-208ENST00000482310 TBK1Q9UHD2 729 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 TRMT6Q9UJA5 497 aaKnown RBP12.97□□□□□ -0.33
HDAC1-208ENST00000482310 PLAAQ9Y263 795 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 WDR37Q9Y2I8 494 aa12.97□□□□□ -0.33
HDAC1-208ENST00000482310 NEMP2A6NFY4 417 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 OR52A4PA6NMU1 304 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 TRIM38O00635 465 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 PHGDHO43175 533 aaKnown RBP12.96□□□□□ -0.33
HDAC1-208ENST00000482310 SIGLEC6O43699 453 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 APOA4P06727 396 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 ITGA2BP08514 1039 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 SLC35G4P0C7Q5 338 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 ALPPL2P10696 532 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 AOAHP28039 575 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 GCAP28676 217 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 LIMK2P53671 638 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 SLC12A2P55011 1212 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 ADARP55265 1226 aaKnown RBP12.96□□□□□ -0.33
HDAC1-208ENST00000482310 BIRC2Q13490 618 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 SUZ12Q15022 739 aaKnown RBP12.96□□□□□ -0.33
HDAC1-208ENST00000482310 XKR5Q6UX68 686 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 CMC1Q7Z7K0 106 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 CD200R1Q8TD46 325 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 RHBDD1Q8TEB9 315 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 DCAKDQ8WVC6 231 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 LINC00615Q96LM1 132 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-208ENST00000482310 RMDN2Q96LZ7 410 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 C12orf66Q96MD2 445 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 CCDC77Q9BR77 488 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 FUT8Q9BYC5 575 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 IMP3Q9NV31 184 aaKnown RBP12.96□□□□□ -0.33
HDAC1-208ENST00000482310 TAS2R13Q9NYV9 303 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 MED16Q9Y2X0 877 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 VWA7Q9Y334 891 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 COMMD10Q9Y6G5 202 aa12.96□□□□□ -0.33
HDAC1-208ENST00000482310 DNMT3AQ9Y6K1 912 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-208ENST00000482310 COL5A1P20908 1838 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-208ENST00000482310 PCM1Q15154 2024 aa12.96□□□□□ -0.34
HDAC1-208ENST00000482310 ASXL3Q9C0F0 2248 aa12.96□□□□□ -0.34
HDAC1-208ENST00000482310 SNRNP200O75643 2136 aaKnown RBP12.95□□□□□ -0.34
HDAC1-208ENST00000482310 PRAMEF33A0A0G2JMD5 474 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 TLDC2A0PJX2 215 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 CCDC151A5D8V7 595 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 LIN7AO14910 233 aaPredicted RBP12.95□□□□□ -0.34
HDAC1-208ENST00000482310 SH3BP5O60239 455 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 PCDHGA12O60330 932 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 ZNF883P0CG24 379 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 GIMD1P0DJR0 217 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 CD59P13987 128 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 BRAFP15056 766 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 FDXRP22570 491 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 HALP42357 657 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 PPM1FP49593 454 aaPredicted RBP12.95□□□□□ -0.34
HDAC1-208ENST00000482310 CLCN7P51798 805 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 TAS2R39P59534 338 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 TIAL1Q01085 375 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■□□□□ 9
HDAC1-208ENST00000482310 DMPKQ09013 629 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 ABRQ12979 859 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 CLCA4Q14CN2 919 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 INAVAQ3KP66 663 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 ZNF658BQ4V348 819 aaPredicted RBP12.95□□□□□ -0.34
HDAC1-208ENST00000482310 CCDC157Q569K6 752 aa12.95□□□□□ -0.34
HDAC1-208ENST00000482310 ACSBG2Q5FVE4 666 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms