RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 LYVE1Q9Y5Y7 322 aa3.59□□□□□ -1.83
COPA-204ENST00000481522 ACEP12821 1306 aa3.59□□□□□ -1.83
COPA-204ENST00000481522 DHX29Q7Z478 1369 aaKnown RBP3.59□□□□□ -1.83
COPA-204ENST00000481522 KIF1AQ12756 1690 aa3.59□□□□□ -1.84
COPA-204ENST00000481522 CEP152O94986 1710 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 TOGARAM1Q9Y4F4 1720 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 PKD1L1Q8TDX9 2849 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 A0A0G2JPF8 293 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 MYO1GB0I1T2 1018 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 HNRNPCL3B7ZW38 293 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 CELF2O95319 508 aaKnown RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 IGKV3-20P01619 116 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 HNRNPCL4P0DMR1 293 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 TMEM11P17152 192 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 DGKAP23743 735 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 TMPOP42166 694 aaKnown RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 PRCPP42785 496 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 CLCN3P51790 818 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 MRPS34P82930 218 aaKnown RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 TROAPQ12815 778 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 MAD2L1Q13257 205 aaPredicted RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 CRYMQ14894 314 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 ZRSR1Q15695 479 aaKnown RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 ZSCAN23Q3MJ62 389 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 KRT71Q3SY84 523 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 KCNT1Q5JUK3 1230 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 DCST1Q5T197 706 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 FBXL22Q6P050 247 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 GLDNQ6ZMI3 551 aaPredicted RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 TUBA1AQ71U36 451 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 RNF168Q8IYW5 571 aaPredicted RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 SCFD2Q8WU76 684 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 TMEM255BQ8WV15 326 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 DNASE2BQ8WZ79 361 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 FIG4Q92562 907 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 USP6NLQ92738 828 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 APBB2Q92870 758 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 ZKSCAN4Q969J2 545 aaPredicted RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 GRAMD2BQ96HH9 432 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 PPP1R13BQ96KQ4 1090 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 TIGD1Q96MW7 591 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 INPP4AQ96PE3 977 aaPredicted RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 SEPT5Q99719 369 aaPredicted RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 TUBA1CQ9BQE3 449 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 SPRY4Q9C004 299 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 PDZD7Q9H5P4 517 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 KAT14Q9H8E8 782 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 EVA1AQ9H8M9 152 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 EBF2Q9HAK2 575 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 SEBOXQ9HB31 216 aaPredicted RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 EIF2B3Q9NR50 452 aaKnown RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 DONSONQ9NYP3 566 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 OR14J1Q9UGF5 321 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 ACSL5Q9ULC5 683 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 FLNAP21333 2647 aaKnown RBP3.58□□□□□ -1.84
COPA-204ENST00000481522 PIK3R4Q99570 1358 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 ZFYVE9O95405 1425 aa3.58□□□□□ -1.84
COPA-204ENST00000481522 C1orf226A1L170 272 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 PRAC2D3DTV9 90 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 M0QZ24 198 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 TULP2O00295 520 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 HS3ST1O14792 307 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 LINC01565O15544 149 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 ZBED4O75132 1171 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 DAB1O75553 588 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 RARGP13631 454 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 EPHX2P34913 555 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 USP8P40818 1118 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 IL15P40933 162 aaPredicted RBP3.57□□□□□ -1.84
COPA-204ENST00000481522 GALCP54803 685 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 NAP1L1P55209 391 aaKnown RBP3.57□□□□□ -1.84
COPA-204ENST00000481522 DLX5P56178 289 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 TAS2R40P59535 323 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 PDE1BQ01064 536 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 ZBTB17Q13105 803 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 DECR1Q16698 335 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 PNLIPRP3Q17RR3 467 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 GKAP1Q5VSY0 366 aaPredicted RBP3.57□□□□□ -1.84
COPA-204ENST00000481522 KLHL35Q6PF15 583 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 MON2Q7Z3U7 1717 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 GPR180Q86V85 440 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 TICAM1Q8IUC6 712 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 TEX11Q8IYF3 940 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 HACE1Q8IYU2 909 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 RNF113BQ8IZP6 322 aaKnown RBP3.57□□□□□ -1.84
COPA-204ENST00000481522 SRBD1Q8N5C6 995 aaKnown RBP3.57□□□□□ -1.84
COPA-204ENST00000481522 ZNF441Q8N8Z8 693 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 LMNTD1Q8N9Z9 388 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 SPATA22Q8NHS9 363 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 SORCS1Q8WY21 1168 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 TAAR8Q969N4 342 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 CMTM3Q96MX0 182 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 MTERF1Q99551 399 aaKnown RBP3.57□□□□□ -1.84
COPA-204ENST00000481522 CMKLR1Q99788 373 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 WNK3Q9BYP7 1800 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 MAF1Q9H063 256 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 SIL1Q9H173 461 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 UBTD1Q9HAC8 227 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 BIRC6Q9NR09 4857 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms