RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TNNC2P02585 160 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 FCER2P06734 321 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 GNSP15586 552 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 CAPN3P20807 821 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 ADORA1P30542 326 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 VEGFCP49767 419 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 AP1S1P61966 158 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 PTPN11Q06124 597 aaPredicted RBP10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 GRB10Q13322 594 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 STXBP2Q15833 593 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 KRBOX4Q5JUW0 171 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 TBCELQ5QJ74 424 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 ZCCHC23Q6ZST2 131 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 RAB11FIP2Q7L804 512 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 OTOP1Q7RTM1 612 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 DHFR2Q86XF0 187 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 ZDHHC17Q8IUH5 632 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 PPIL6Q8IXY8 311 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 RNF113BQ8IZP6 322 aaKnown RBP10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 C8orf59Q8N0T1 100 aaPredicted RBP10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 OXR1Q8N573 874 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 EIF4E3Q8N5X7 224 aaKnown RBP10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 C12orf29Q8N999 325 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 PCSK9Q8NBP7 692 aaKnown RBP10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 C11orf65Q8NCR3 313 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 SFT2D1Q8WV19 159 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 CANT1Q8WVQ1 401 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 RAD54LQ92698 747 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 ZNF566Q969W8 418 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 RNF145Q96MT1 663 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 WDR83Q9BRX9 315 aaKnown RBP10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 HEXA-AS1Q9H8Q6 139 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 SMYD2Q9NRG4 433 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 TBC1D13Q9NVG8 400 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 ADA2Q9NZK5 511 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 ADAM30Q9UKF2 790 aa10.23□□□□□ -0.77
PRPF4B-206ENST00000481109 ROBO3Q96MS0 1386 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 CCDC163A0A0D9SF12 145 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 OR6C74A6NCV1 312 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 A8MVJ9 347 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 A8MXK9 166 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 USP17L13C9JLJ4 530 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 USP17L17D6RBQ6 530 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 SLC31A2O15432 143 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 MRPS14O60783 128 aaKnown RBP10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 USP2O75604 605 aaPredicted RBP10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 SHMT2P34897 504 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 HSPA2P54652 639 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 PLIN5Q00G26 463 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 MVKQ03426 396 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 STX4Q12846 297 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 FGL2Q14314 439 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 SSX2Q16385 188 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 RIC1Q4ADV7 1423 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 SAMD4BQ5PRF9 694 aaKnown RBP10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 KANK2Q63ZY3 851 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 PLA2G4FQ68DD2 849 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 SLC25A25Q6KCM7 469 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 USP53Q70EK8 1073 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 STRA8Q7Z7C7 330 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 TMC8Q8IU68 726 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 SYNE4Q8N205 404 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 EMC1Q8N766 993 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 FAM156AQ8NDB6 213 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 METTL6Q8TCB7 284 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 UPF1Q92900 1129 aaKnown RBP eCLIP10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 KAT5Q92993 513 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 SLC35C1Q96A29 364 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 NEU1Q99519 415 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 SH2D3AQ9BRG2 576 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 NTPCRQ9BSD7 190 aaKnown RBP10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 BEX2Q9BXY8 128 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 PCDHAC1Q9H158 963 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 PPIL3Q9H2H8 161 aaKnown RBP10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 MVB12BQ9H7P6 319 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 RNF121Q9H920 327 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 KLHL1Q9NR64 748 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 TRMT13Q9NUP7 481 aaKnown RBP10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 BTNL2Q9UIR0 455 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 TRPV2Q9Y5S1 764 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 A0A0G2JPF8 293 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 TCRBV9S1A1TA0A576 114 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 HNRNPCL3B7ZW38 293 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 CST8O60676 142 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 LILRB5O75023 590 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 CRTAPO75718 401 aaPredicted RBP10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 EIF3GO75821 320 aaKnown RBP eCLIP10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 DGAT1O75907 488 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 SOX30O94993 753 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 HNRNPCL4P0DMR1 293 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 PDGFRAP16234 1089 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 TMEM11P17152 192 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 SPI1P17947 270 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 RAB4AP20338 218 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 NR2F2P24468 414 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 TIE1P35590 1138 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 NRLP54845 237 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 PSPHP78330 225 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 GTF2BQ00403 316 aa10.22□□□□□ -0.77
PRPF4B-206ENST00000481109 ASAH1Q13510 395 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms