RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 E7EQ34 232 aa13□□□□□ -0.33
NDC1-202ENST00000480952 KCNK1O00180 336 aa13□□□□□ -0.33
NDC1-202ENST00000480952 KLF7O75840 302 aaPredicted RBP13□□□□□ -0.33
NDC1-202ENST00000480952 EDN3P14138 238 aa13□□□□□ -0.33
NDC1-202ENST00000480952 POLR2CP19387 275 aaPredicted RBP13□□□□□ -0.33
NDC1-202ENST00000480952 CDK11BP21127 795 aaKnown RBP13□□□□□ -0.33
NDC1-202ENST00000480952 PBLDP30039 288 aaPredicted RBP13□□□□□ -0.33
NDC1-202ENST00000480952 SLC25A11Q02978 314 aaKnown RBP13□□□□□ -0.33
NDC1-202ENST00000480952 NFE2L1Q14494 772 aa13□□□□□ -0.33
NDC1-202ENST00000480952 ASIC2Q16515 512 aa13□□□□□ -0.33
NDC1-202ENST00000480952 PCSK7Q16549 785 aa13□□□□□ -0.33
NDC1-202ENST00000480952 ZNF789Q5FWF6 425 aa13□□□□□ -0.33
NDC1-202ENST00000480952 CCDC183Q5T5S1 534 aa13□□□□□ -0.33
NDC1-202ENST00000480952 CCDC70Q6NSX1 233 aa13□□□□□ -0.33
NDC1-202ENST00000480952 TMEM220Q6QAJ8 160 aa13□□□□□ -0.33
NDC1-202ENST00000480952 FJX1Q86VR8 437 aa13□□□□□ -0.33
NDC1-202ENST00000480952 RASGEF1AQ8N9B8 481 aa13□□□□□ -0.33
NDC1-202ENST00000480952 OR4E2Q8NGC2 313 aa13□□□□□ -0.33
NDC1-202ENST00000480952 GRHL3Q8TE85 626 aa13□□□□□ -0.33
NDC1-202ENST00000480952 C12orf66Q96MD2 445 aa13□□□□□ -0.33
NDC1-202ENST00000480952 TRIB3Q96RU7 358 aa13□□□□□ -0.33
NDC1-202ENST00000480952 INSM2Q96T92 566 aaPredicted RBP13□□□□□ -0.33
NDC1-202ENST00000480952 WDR77Q9BQA1 342 aaPredicted RBP13□□□□□ -0.33
NDC1-202ENST00000480952 ZCCHC2Q9C0B9 1178 aaKnown RBP13□□□□□ -0.33
NDC1-202ENST00000480952 WWP1Q9H0M0 922 aa13□□□□□ -0.33
NDC1-202ENST00000480952 NUP62CLQ9H1M0 184 aa13□□□□□ -0.33
NDC1-202ENST00000480952 ATP13A2Q9NQ11 1180 aa13□□□□□ -0.33
NDC1-202ENST00000480952 C1GALT1Q9NS00 363 aa13□□□□□ -0.33
NDC1-202ENST00000480952 P4HTMQ9NXG6 502 aa13□□□□□ -0.33
NDC1-202ENST00000480952 LIMA1Q9UHB6 759 aaKnown RBP13□□□□□ -0.33
NDC1-202ENST00000480952 GPN3Q9UHW5 284 aaPredicted RBP13□□□□□ -0.33
NDC1-202ENST00000480952 SLC24A2Q9UI40 661 aa13□□□□□ -0.33
NDC1-202ENST00000480952 PTRH2Q9Y3E5 179 aaKnown RBP13□□□□□ -0.33
NDC1-202ENST00000480952 DNMT3AQ9Y6K1 912 aaPredicted RBP13□□□□□ -0.33
NDC1-202ENST00000480952 SETD2Q9BYW2 2564 aaPredicted RBP12.99□□□□□ -0.33
NDC1-202ENST00000480952 OR2AG2A6NM03 316 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 ZNF749O43361 778 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 HBQ1P09105 142 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 HLA-DPA1P20036 260 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 FOLR3P41439 243 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 CTSCP53634 463 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 GBE1Q04446 702 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 KRT33BQ14525 404 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 METRNLQ641Q3 311 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 DUS1LQ6P1R4 473 aaKnown RBP12.99□□□□□ -0.33
NDC1-202ENST00000480952 B4GALNT4Q76KP1 1039 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 ZNF571Q7Z3V5 609 aaPredicted RBP12.99□□□□□ -0.33
NDC1-202ENST00000480952 GDF7Q7Z4P5 450 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 BEND7Q8N7W2 519 aaPredicted RBP12.99□□□□□ -0.33
NDC1-202ENST00000480952 KCTD6Q8NC69 237 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 DNAJB14Q8TBM8 379 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 FAM71BQ8TC56 605 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 FAR1Q8WVX9 515 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 BTBD6Q96KE9 485 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 SRPK1Q96SB4 655 aaKnown RBP12.99□□□□□ -0.33
NDC1-202ENST00000480952 C17orf62Q9BQA9 187 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 KIR3DX1Q9H7L2 352 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 CBX8Q9HC52 389 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 IP6K2Q9UHH9 426 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 MYO6Q9UM54 1294 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 NOVA2Q9UNW9 492 aaKnown RBP12.99□□□□□ -0.33
NDC1-202ENST00000480952 COLEC10Q9Y6Z7 277 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 PDZD2O15018 2839 aa12.99□□□□□ -0.33
NDC1-202ENST00000480952 CSMD2Q7Z408 3487 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 CELSR1Q9NYQ6 3014 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 GSAPA4D1B5 854 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 LRRC53A6NM62 1247 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 MASP2O00187 686 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 DDX3XO00571 662 aaKnown RBP eCLIP12.98□□□□□ -0.334e-12■■■■■ 43.9
NDC1-202ENST00000480952 E2F3O00716 465 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 AURKAO14965 403 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 CD63P08962 238 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 SOX8P57073 446 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 CDC16Q13042 620 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 DPYSL3Q14195 570 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 GSE1Q14687 1217 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 HIF1AQ16665 826 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 CYP2A13Q16696 494 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 HADHQ16836 314 aaKnown RBP12.98□□□□□ -0.33
NDC1-202ENST00000480952 LDLRAP1Q5SW96 308 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 NT5DC3Q86UY8 548 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 GPR135Q8IZ08 494 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 CNTD1Q8N815 330 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 NIPA2Q8N8Q9 360 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 HDAC11Q96DB2 347 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 LURAP1Q96LR2 239 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 GBP5Q96PP8 586 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 TRAPPC9Q96Q05 1148 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 POMT2Q9UKY4 750 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 ACSL5Q9ULC5 683 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 CSAG2Q9Y5P2 127 aa12.98□□□□□ -0.33
NDC1-202ENST00000480952 DIDO1Q9BTC0 2240 aaKnown RBP12.98□□□□□ -0.33
NDC1-202ENST00000480952 ZFHX3Q15911 3703 aa12.97□□□□□ -0.33
NDC1-202ENST00000480952 A0A1W2PQJ5 194 aa12.97□□□□□ -0.33
NDC1-202ENST00000480952 LRRC10BA6NIK2 292 aa12.97□□□□□ -0.33
NDC1-202ENST00000480952 MATN2O00339 956 aa12.97□□□□□ -0.33
NDC1-202ENST00000480952 UGT1A9O60656 530 aa12.97□□□□□ -0.33
NDC1-202ENST00000480952 STSP08842 583 aa12.97□□□□□ -0.33
NDC1-202ENST00000480952 MSL3P1P0C860 447 aa12.97□□□□□ -0.33
NDC1-202ENST00000480952 UGT1A6P19224 532 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms