RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SETD1AO15047 1707 aaKnown RBP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 UGT2B4P06133 528 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 CCR8P51685 355 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.43□□□□□ -0.91e-6■■□□□ 12.7
VEGFA-212ENST00000480614 EIF2S3LQ2VIR3 472 aaKnown RBP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 LINC00471Q8N535 108 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 THRSPQ92748 146 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 WNK2Q9Y3S1 2297 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 C1RP00736 705 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF3P17036 446 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 GNAZP19086 355 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 CYP3A5P20815 502 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 FMO1Q01740 532 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 SP3Q02447 781 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 CTBP1Q13363 440 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 CADM2Q8N3J6 435 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 IPCEF1Q8WWN9 437 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 AZIN2Q96A70 460 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 LGMNQ99538 433 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 MAGEH1Q9H213 219 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 BLOC1S4Q9NUP1 217 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 SCN3AQ9NY46 2000 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 TMEM150CB9EJG8 249 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 PSMD10O75832 226 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 SCRN3Q0VDG4 424 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 SLC1A5Q15758 541 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 TEX44Q53QW1 395 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 AHSA2Q719I0 299 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 GAS2L1Q99501 681 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 CFAP97Q9P2B7 532 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 PHF24Q9UPV7 400 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 MAP4K5Q9Y4K4 846 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 GRIN2DO15399 1336 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 NUP98P52948 1817 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 NOL4O94818 638 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 CLCN7P51798 805 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 PRKD1Q15139 912 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ATAT1Q5SQI0 421 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 SAPCD2Q86UD0 394 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 C7orf26Q96N11 449 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 E9PAM4 449 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 H3BUI4 141 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ADRB2P07550 413 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF20P17024 532 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ACVR2AP27037 513 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 MAGEA2P43356 314 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ILF3Q12906 894 aaKnown RBP eCLIP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 GRHL2Q6ISB3 625 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 LCLAT1Q6UWP7 414 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 C15orf52Q6ZUT6 534 aaKnown RBP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ADGRD2Q7Z7M1 963 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 TWIST2Q8WVJ9 160 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF514Q96K75 400 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 NPAS2Q99743 824 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 RHPN2P1A8MT19 583 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 FKTNO75072 461 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 RLN2P04090 185 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 SHBGP04278 402 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 APLP1P51693 650 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 C2orf80Q0P641 193 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 DACT2Q5SW24 774 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 USP43Q70EL4 1123 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ZSWIM3Q96MP5 696 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 LMO7Q8WWI1 1683 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 LSM1O15116 133 aaKnown RBP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 NT5EP21589 574 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 PBX3P40426 434 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 APOBEC3HQ6NTF7 200 aaKnown RBP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 DNAAF5Q86Y56 855 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ZFPM1Q8IX07 1006 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 PIGKQ92643 395 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 C8orf48Q96LL4 319 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 EQTNQ9NQ60 294 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 TPD52L2O43399 206 aaKnown RBP9.43□□□□□ -0.9
VEGFA-212ENST00000480614 TSPAN5P62079 268 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 ALG2Q9H553 416 aa9.43□□□□□ -0.9
VEGFA-212ENST00000480614 TFECO14948 347 aaPredicted RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 OR1I1O60431 355 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ANGPTL1O95841 491 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 TIE1P35590 1138 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 PTP4A2Q12974 167 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 C1orf189Q5VU69 101 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 CRYBG2Q8N1P7 616 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 NXPE2Q96DL1 559 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 SLC6A15Q9H2J7 730 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 C12orf4Q9NQ89 552 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 TAS2R14Q9NYV8 317 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 MOCS1Q9NZB8 636 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 PCDHGA10Q9Y5H3 936 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 UBIAD1Q9Y5Z9 338 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 YDJCA8MPS7 323 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 NPHS1O60500 1241 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ZMPSTE24O75844 475 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ZSCAN5DPP0CG00 497 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 MTHFD1P11586 935 aaKnown RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ECHS1P30084 290 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 COLEC12Q5KU26 742 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 CXCL17Q6UXB2 119 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 SUN3Q8TAQ9 357 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ITM2CQ9NQX7 267 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms