RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 MVKQ03426 396 aa20.94■□□□□ 0.94
SDF4-206ENST00000478938 MFSD13AQ14CX5 517 aa20.94■□□□□ 0.94
SDF4-206ENST00000478938 NDUFAF5Q5TEU4 345 aa20.94■□□□□ 0.94
SDF4-206ENST00000478938 NIPA1Q7RTP0 329 aa20.94■□□□□ 0.94
SDF4-206ENST00000478938 CDH24Q86UP0 819 aa20.94■□□□□ 0.94
SDF4-206ENST00000478938 PSTKQ8IV42 348 aaKnown RBP20.94■□□□□ 0.94
SDF4-206ENST00000478938 TRPM4Q8TD43 1214 aa20.94■□□□□ 0.94
SDF4-206ENST00000478938 PRDM12Q9H4Q4 367 aa20.94■□□□□ 0.94
SDF4-206ENST00000478938 CCDC59Q9P031 241 aaKnown RBP20.94■□□□□ 0.94
SDF4-206ENST00000478938 TRMT6Q9UJA5 497 aaKnown RBP20.94■□□□□ 0.94
SDF4-206ENST00000478938 HSPB11Q9Y547 144 aa20.94■□□□□ 0.94
SDF4-206ENST00000478938 CIB4A0PJX0 185 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 M0R082 166 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 TSC22D2O75157 780 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 DDCP20711 480 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 CSTF2P33240 577 aaKnown RBP eCLIP20.93■□□□□ 0.94
SDF4-206ENST00000478938 KCNK10P57789 538 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 MTPNP58546 118 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 ALDH6A1Q02252 535 aaKnown RBP20.93■□□□□ 0.94
SDF4-206ENST00000478938 OR10T2Q8NGX3 314 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 MARC2Q969Z3 335 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 AKT1S1Q96B36 256 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 CEP19Q96LK0 163 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 KCNA7Q96RP8 456 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 EVA1BQ9NVM1 165 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 B3GNT2Q9NY97 397 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 CPSF3Q9UKF6 684 aaKnown RBP20.93■□□□□ 0.94
SDF4-206ENST00000478938 PCDHGB2Q9Y5G2 931 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 SNX8Q9Y5X2 465 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 UGT2B17O75795 530 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 TP53P04637 393 aaPredicted RBP20.93■□□□□ 0.94
SDF4-206ENST00000478938 RPS5P46782 204 aaKnown RBP20.93■□□□□ 0.94
SDF4-206ENST00000478938 UGT2B15P54855 530 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 BNC1Q01954 994 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 TRIM60Q495X7 471 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 SCUBE3Q8IX30 993 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 LINC00469Q8N7U9 141 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 TTLQ8NG68 377 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 SLC30A2Q9BRI3 323 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 OR51E2Q9H255 320 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 CDHR5Q9HBB8 845 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 GBA2Q9HCG7 927 aaPredicted RBP20.93■□□□□ 0.94
SDF4-206ENST00000478938 UBP1Q9NZI7 540 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 MUTYHQ9UIF7 546 aa20.93■□□□□ 0.94
SDF4-206ENST00000478938 BET1O15155 118 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 PIGRP01833 764 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 LINC00032P0C843 101 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 SFNP31947 248 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 DCTP40126 519 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 ETV6P41212 452 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 DAB2P98082 770 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 LAPTM4AQ15012 233 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 LAMTOR1Q6IAA8 161 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 SWSAP1Q6NVH7 229 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 TWIST2Q8WVJ9 160 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 KHSRPQ92945 711 aaKnown RBP eCLIP20.92■□□□□ 0.94
SDF4-206ENST00000478938 WASH6PQ9NQA3 447 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 MAN2B2Q9Y2E5 1009 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 ZNF487B1APH4 448 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 CYP2C8P10632 490 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 KRT20P35900 424 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 SH3BP2P78314 561 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 IL18R1Q13478 541 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 EMC2Q15006 297 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 BAK1Q16611 211 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 FSCN1Q16658 493 aaKnown RBP20.92■□□□□ 0.94
SDF4-206ENST00000478938 COQ5Q5HYK3 327 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 CLVS2Q5SYC1 327 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 CREB3L2Q70SY1 520 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 SVOPLQ8N434 492 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 OR10Z1Q8NGY1 313 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 SETD6Q8TBK2 473 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 TMEM176AQ96HP8 235 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 LRRC3Q9BY71 257 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 B3GNT5Q9BYG0 378 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 RASSF1Q9NS23 344 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 COMMD8Q9NX08 183 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 USP3Q9Y6I4 520 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 KATNA1O75449 491 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 ZNF30P17039 623 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 TNK1Q13470 666 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 MXD4Q14582 209 aaPredicted RBP20.92■□□□□ 0.94
SDF4-206ENST00000478938 FAM171BQ6P995 826 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 KBTBD8Q8NFY9 601 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 SLC2A14Q8TDB8 520 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 UBE2FQ969M7 185 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 PCDHA10Q9Y5I2 948 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 ORC6Q9Y5N6 252 aa20.92■□□□□ 0.94
SDF4-206ENST00000478938 EGFRP00533 1210 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 GLUD2P49448 558 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 PRIM2P49643 509 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 OSTNP61366 133 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 EMX2Q04743 252 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 PPM1MQ96MI6 270 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 MLPHQ9BV36 600 aaPredicted RBP20.91■□□□□ 0.94
SDF4-206ENST00000478938 TUBB1Q9H4B7 451 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 POLG2Q9UHN1 485 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 B3GALNT1O75752 331 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 ZNF37AP17032 561 aaPredicted RBP20.91■□□□□ 0.94
SDF4-206ENST00000478938 MYL9P24844 172 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms