RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 C1orf232A0A0U1RR37 186 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 FFAR2O15552 330 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 FZD6O60353 706 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 DFNA5O60443 496 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 PFDN1O60925 122 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 SLC25A14O95258 325 aaPredicted RBP10.64□□□□□ -0.71
VPS52-217ENST00000478934 ATE1O95260 518 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 GJA1P17302 382 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 CD247P20963 164 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 PTGER3P43115 390 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 TUFMP49411 452 aaKnown RBP10.64□□□□□ -0.71
VPS52-217ENST00000478934 CDK9P50750 372 aaKnown RBP10.64□□□□□ -0.71
VPS52-217ENST00000478934 LAPTM5Q13571 262 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 TBC1D25Q3MII6 688 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 ARMC12Q5T9G4 340 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 CYP20A1Q6UW02 462 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 TPGS1Q6ZTW0 290 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 TMEM26Q6ZUK4 368 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 GPR141Q7Z602 305 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 DNAJB7Q7Z6W7 309 aaPredicted RBP10.64□□□□□ -0.71
VPS52-217ENST00000478934 FAM126BQ8IXS8 530 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 SLC22A15Q8IZD6 547 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 HS3ST5Q8IZT8 346 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 KRTCAP2Q8N6L1 136 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 DRAXINQ8NBI3 349 aaPredicted RBP10.64□□□□□ -0.71
VPS52-217ENST00000478934 OR10Q1Q8NGQ4 319 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 PIH1D2Q8WWB5 315 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 MYLIPQ8WY64 445 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 PLD4Q96BZ4 506 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 SMG9Q9H0W8 520 aaKnown RBP10.64□□□□□ -0.71
VPS52-217ENST00000478934 IKZF5Q9H5V7 419 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 IL26Q9NPH9 171 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 SLC8A2Q9UPR5 921 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 DHRS7Q9Y394 339 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 OR51B4Q9Y5P0 310 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 FADS3Q9Y5Q0 445 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 PLXNA4Q9HCM2 1894 aa10.64□□□□□ -0.71
VPS52-217ENST00000478934 PRMT5O14744 637 aaPredicted RBP10.63□□□□□ -0.71
VPS52-217ENST00000478934 LSM1O15116 133 aaKnown RBP10.63□□□□□ -0.71
VPS52-217ENST00000478934 C1QCP02747 245 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 SLC2A4P14672 509 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 TCF3P15923 654 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 HNF1BP35680 557 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 RPL38P63173 70 aaKnown RBP10.63□□□□□ -0.71
VPS52-217ENST00000478934 BNIP2Q12982 314 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 TRAF3Q13114 568 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 ATP6AP1Q15904 470 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 SLC36A3Q495N2 470 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 GTDC1Q4AE62 458 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 PRMT9Q6P2P2 845 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 TXNDC11Q6PKC3 985 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 DTWD1Q8N5C7 304 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 SEPT8Q92599 483 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS52-217ENST00000478934 ALG14Q96F25 216 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 CENPNQ96H22 339 aaPredicted RBP10.63□□□□□ -0.71
VPS52-217ENST00000478934 ZNF382Q96SR6 550 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 EGFL8Q99944 293 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 CHID1Q9BWS9 393 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 TRIM54Q9BYV2 358 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 SUN2Q9UH99 717 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 LEF1Q9UJU2 399 aaPredicted RBP10.63□□□□□ -0.71
VPS52-217ENST00000478934 NEUROG3Q9Y4Z2 214 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 H0YJX3 145 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 GREM1O60565 184 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 VPS4BO75351 444 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 ESR1P03372 595 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 PSMA3P25788 255 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 RFC2P35250 354 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 HMGCLP35914 325 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 POLR2IP36954 125 aaKnown RBP10.63□□□□□ -0.71
VPS52-217ENST00000478934 CTSOP43234 321 aaPredicted RBP10.63□□□□□ -0.71
VPS52-217ENST00000478934 ADARP55265 1226 aaKnown RBP10.63□□□□□ -0.71
VPS52-217ENST00000478934 CYP4F8P98187 520 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 CACNG1Q06432 222 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 CDH18Q13634 790 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 CYBRD1Q53TN4 286 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 GLYATQ6IB77 296 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 CHST9Q7L1S5 443 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 ITIH5Q86UX2 942 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 ZFAND4Q86XD8 727 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 ZNF461Q8TAF7 563 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 NUSAP1Q9BXS6 441 aaKnown RBP10.63□□□□□ -0.71
VPS52-217ENST00000478934 CWH43Q9H720 699 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 POLR1BQ9H9Y6 1135 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 SLC6A13Q9NSD5 602 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 VAPAQ9P0L0 249 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 PADI4Q9UM07 663 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 ST14Q9Y5Y6 855 aa10.63□□□□□ -0.71
VPS52-217ENST00000478934 A0A1W2PPW3 197 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 FAM234BA2RU67 622 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 ANKRD28O15084 1053 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 PGLSO95336 258 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 NR4A1P22736 598 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 MYF6P23409 242 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 STK19P49842 368 aaPredicted RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 CLCN4P51793 760 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 PIGFQ07326 219 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 ELAVL2Q12926 359 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 PRKG2Q13237 762 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms