RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 L1CAMP32004 1257 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 CCNFP41002 786 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 MAP3K8P41279 467 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 HTD2P86397 168 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 CLCQ05315 142 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 CRY2Q49AN0 593 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 RPL13AP3Q6NVV1 102 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 SLC29A4Q7RTT9 530 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ZC3H7AQ8IWR0 971 aaKnown RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 CHST4Q8NCG5 386 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 IL17RDQ8NFM7 739 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 COQ8AQ8NI60 647 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 SOCS4Q8WXH5 440 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ASB15Q8WXK1 588 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.37□□□□□ -1.55
USF3-202ENST00000478658 USP21Q9UK80 565 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBX20Q9UMR3 447 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 PHF24Q9UPV7 400 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TP53TG5Q9Y2B4 290 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBC1D3DA0A087WVF3 549 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBC1D3IA0A087WXS9 549 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBC1D3EA0A087X179 549 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBC1D3KA0A087X1G2 549 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 XKRY2A2RUG3 117 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 FAM221BA6H8Z2 402 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBC1D3FA6NER0 549 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 NEMP2A6NFY4 417 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBC1D3LB9A6J9 549 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ADAMDEC1O15204 470 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 LGR5O75473 907 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 KLK3P07288 261 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 TBC1D3HP0C7X1 549 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 RXRBP28702 533 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 SLC7A1P30825 629 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 NDUFA6P56556 154 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 BTN1A1Q13410 526 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 GRIN2CQ14957 1233 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 IQCJQ1A5X6 159 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBCELQ5QJ74 424 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 KIAA0895LQ68EN5 471 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBC1D3GQ6DHY5 549 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBC1D3CQ6IPX1 549 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 KIAA1161Q6NSJ0 714 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 LRRN1Q6UXK5 716 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ZNF730Q6ZMV8 503 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 NAA40Q86UY6 237 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TBC1D3Q8IZP1 549 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 IPMKQ8NFU5 416 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 MAPK15Q8TD08 544 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 TFGQ92734 400 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 PRG4Q92954 1404 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 NXPE3Q969Y0 559 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 CDCA5Q96FF9 252 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 DYNLL2Q96FJ2 89 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ZNF347Q96SE7 839 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 SLC32A1Q9H598 525 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 COG5Q9UP83 839 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 NAALAD2Q9Y3Q0 740 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ADCY9O60503 1353 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 IQCMA0A1B0GVH7 501 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 CLDN25C9JDP6 229 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ERBB2P04626 1255 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 DPEP1P16444 411 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 KIR2DL3P43628 341 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 SLCO1A2P46721 670 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 PEX3P56589 373 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 BCL2L1Q07817 233 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ERFEQ4G0M1 354 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 SBK1Q52WX2 424 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 PDPK2PQ6A1A2 396 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ZNF470Q6ECI4 717 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 DPY19L2P1Q6NXN4 242 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ARHGAP36Q6ZRI8 547 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ECHDC2Q86YB7 292 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 EIF1ADQ8N9N8 165 aaKnown RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 OR6Y1Q8NGX8 325 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 C11orf24Q96F05 449 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 CIB1Q99828 191 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ZNF559Q9BR84 538 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 POTEKPQ9BYX7 375 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 MED31Q9Y3C7 131 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 MAGI1Q96QZ7 1491 aaPredicted RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 GPR75-ASB3A0A0A6YYF3 556 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 C1orf232A0A0U1RR37 186 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 OR2M5A3KFT3 312 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ENDOD1O94919 500 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 OR4E1P0C645 316 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 BCKDHAP12694 445 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 IL4RP24394 825 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 RPS12P25398 132 aaKnown RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 G0S2P27469 103 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 MC4RP32245 332 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 DMTNQ08495 405 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 GRIK2Q13002 908 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 SYT13Q7L8C5 426 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 ARL14Q8N4G2 192 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 RPL3LQ92901 407 aaKnown RBP5.37□□□□□ -1.55
USF3-202ENST00000478658 ZDHHC12Q96GR4 267 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 PKP4Q99569 1192 aa5.37□□□□□ -1.55
USF3-202ENST00000478658 NAA11Q9BSU3 229 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms