RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 FOXK2Q01167 660 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TARDBPQ13148 414 aaKnown RBP eCLIP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 CTBP1Q13363 440 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 FASTKD3Q14CZ7 662 aaKnown RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PLCL1Q15111 1095 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TRADDQ15628 312 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 RPE65Q16518 533 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 HSP90AA5PQ58FG0 334 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 RNF187Q5TA31 235 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 AGAP9Q5VTM2 703 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 METRNLQ641Q3 311 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 DUPD1Q68J44 220 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TMPRSS7Q7RTY8 843 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 KCNMB4Q86W47 210 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 CCDC25Q86WR0 208 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TMPRSS12Q86WS5 348 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 CILP2Q8IUL8 1156 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 DENND6AQ8IWF6 608 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ZBED8Q8IZ13 594 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 KRT222Q8N1A0 295 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 FBXO36Q8NEA4 188 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 GPR150Q8NGU9 434 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 LKAAEAR1Q8TD35 194 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 JPH3Q8WXH2 748 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 RMDN2Q96LZ7 410 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 C12orf66Q96MD2 445 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 DEPDC7Q96QD5 511 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 WDR83Q9BRX9 315 aaKnown RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 LRRC1Q9BTT6 524 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 LRRN3Q9H3W5 708 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 FBXO6Q9NRD1 293 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 IARS2Q9NSE4 1012 aaKnown RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 GRHL1Q9NZI5 618 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 WHRNQ9P202 907 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ZNF624Q9P2J8 865 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ZC3H7BQ9UGR2 993 aaKnown RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TSR3Q9UJK0 312 aaKnown RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ACSL5Q9ULC5 683 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 CRYL1Q9Y2S2 319 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PCDHB1Q9Y5F3 818 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 SNRNP200O75643 2136 aaKnown RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 IGHV1OR21-1A0A087WYE8 117 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 KLHL33A6NCF5 533 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 F8W8V4 182 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ZW10O43264 779 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 DUX1O43812 170 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TCEA3O75764 348 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TTC4O95801 387 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 MTHFD1P11586 935 aaKnown RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PNLIPP16233 465 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 XRCC1P18887 633 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 OGNP20774 298 aaKnown RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 MPSTP25325 297 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PDHA2P29803 388 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 SLC19A1P41440 591 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PDX1P52945 283 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 MPP1Q00013 466 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 GUCY2DQ02846 1103 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TUBB2AQ13885 445 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 GPR18Q14330 331 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 KRT33BQ14525 404 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TYSND1Q2T9J0 566 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ZNF789Q5FWF6 425 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 DNTTIP2Q5QJE6 756 aaKnown RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PHF19Q5T6S3 580 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ARMC3Q5W041 872 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ZNF449Q6P9G9 518 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 FOXR1Q6PIV2 292 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ABRAXAS1Q6UWZ7 409 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 XKR5Q6UX68 686 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 UNC5AQ6ZN44 842 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 USP53Q70EK8 1073 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 CENPUQ71F23 418 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ZNF438Q7Z4V0 828 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 B3GNT8Q7Z7M8 397 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 AVL9Q8NBF6 648 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 OR10G6Q8NH81 332 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 FBXO25Q8TCJ0 367 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 LPGAT1Q92604 370 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 LINC00615Q96LM1 132 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 INSM2Q96T92 566 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PLCD4Q9BRC7 762 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 NUDT22Q9BRQ3 303 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 FAM167BQ9BTA0 163 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 NAT9Q9BTE0 207 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TUBB2BQ9BVA1 445 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TSSK1BQ9BXA7 367 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TBC1D10AQ9BXI6 508 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 SLC24A3Q9HC58 644 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 EPB41L5Q9HCM4 733 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 SAYSD1Q9NPB0 183 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 SLC17A6Q9P2U8 582 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 NEUROG3Q9Y4Z2 214 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PKD1L2Q7Z442 2459 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 C17orf113A0A1B0GUU1 675 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 E5RI56 91 aa6.74□□□□□ -1.33
BRCA1-215ENST00000478531 IFRD1O00458 451 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-215ENST00000478531 NTN3O00634 580 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-215ENST00000478531 LIN7AO14910 233 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms