RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 BROXQ5VW32 411 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 SMYD5Q6GMV2 418 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 ARMC8Q8IUR7 673 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 MMAAQ8IVH4 418 aaKnown RBP14.01□□□□□ -0.17
NPHP4-208ENST00000478423 UMODL1-AS1Q8N2C9 162 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 RNFT2Q96EX2 444 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 PTPN18Q99952 460 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 TDRD1Q9BXT4 1180 aaKnown RBP14.01□□□□□ -0.17
NPHP4-208ENST00000478423 AK5Q9Y6K8 562 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 RBM47A0AV96 593 aaKnown RBP14.01□□□□□ -0.17
NPHP4-208ENST00000478423 NDUFB5O43674 189 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 MGRN1O60291 552 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 KERAO60938 352 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 PDE9AO76083 593 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 STC1P52823 247 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 SMIM11AP58511 58 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 XIAPP98170 497 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 PDGFRLQ15198 375 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 ACSBG2Q5FVE4 666 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 RTP2Q5QGT7 225 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 OR10A6Q8NH74 314 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 CENPIQ92674 756 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-208ENST00000478423 MRPL48Q96GC5 212 aaKnown RBP14.01□□□□□ -0.17
NPHP4-208ENST00000478423 TYROBPO43914 113 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 RASGRP1O95267 797 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 TYRP14679 529 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 PAX7P23759 505 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 RPS14P62263 151 aaKnown RBP14.01□□□□□ -0.17
NPHP4-208ENST00000478423 DGKKQ5KSL6 1271 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 BRAT1Q6PJG6 821 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 TIFABQ6ZNK6 161 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 PRR23CQ6ZRP0 262 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 TPRG1Q6ZUI0 275 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 TP53INP2Q8IXH6 220 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 CAMKK1Q8N5S9 505 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 ZNF540Q8NDQ6 660 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 FLRT1Q9NZU1 646 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 ZDHHC2Q9UIJ5 367 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 WASF2Q9Y6W5 498 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 ANKRD12Q6UB98 2062 aa14.01□□□□□ -0.17
NPHP4-208ENST00000478423 AP3D1O14617 1153 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 RFPL1O75677 317 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 CYP4B1P13584 511 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 ZNF37AP17032 561 aaPredicted RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 ECHS1P30084 290 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 MAPK12P53778 367 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 MRPL28Q13084 256 aaKnown RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 INAQ16352 499 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 MYLK3Q32MK0 819 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 USP39Q53GS9 565 aaKnown RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 DEF8Q6ZN54 512 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 AMZ2Q86W34 360 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 SLC22A17Q8WUG5 538 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 IGSF8Q969P0 613 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 EXOSC8Q96B26 276 aaKnown RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 ROPN1LQ96C74 230 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 ZNF514Q96K75 400 aaPredicted RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 PSKH2Q96QS6 385 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 SYT11Q9BT88 431 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 C3orf14Q9HBI5 128 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 EQTNQ9NQ60 294 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 RHBDL2Q9NX52 303 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 ITGB4P16144 1822 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 AKAP11Q9UKA4 1901 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 G3V2T6 193 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 PI15O43692 258 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 FEN1P39748 380 aaKnown RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 TEAD2Q15562 447 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 NAIF1Q69YI7 327 aaPredicted RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 OR8H2Q8N162 312 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 PLD6Q8N2A8 252 aaKnown RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 SRFBP1Q8NEF9 429 aaKnown RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 ST13P5Q8NFI4 369 aaPredicted RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 POF1BQ8WVV4 589 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 RIPOR3Q96MK2 946 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 TRIT1Q9H3H1 467 aaKnown RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 FAM47E-STBD1D6RA91 191 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 ITGB1P05556 798 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 CCR3P51677 355 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 EEF1AKMT1Q8WVE0 214 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 SLC13A3Q8WWT9 602 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 NDRG2Q9UN36 371 aaKnown RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 MRPS33Q9Y291 106 aaKnown RBP14□□□□□ -0.17
NPHP4-208ENST00000478423 OR1F1O43749 312 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 ERVK-8P63133 956 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 PLEKHG6Q3KR16 790 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 KLHL35Q6PF15 583 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 LRRTM3Q86VH5 581 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 ZDHHC14Q8IZN3 488 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 HDDC3Q8N4P3 179 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 PXYLP1Q8TE99 480 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 LCN9Q8WX39 176 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 FNDC11Q9BVV2 318 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 R3HDMLQ9H3Y0 253 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 TLR9Q9NR96 1032 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 GULP1Q9UBP9 304 aa14□□□□□ -0.17
NPHP4-208ENST00000478423 TIAM2Q8IVF5 1701 aa13.99□□□□□ -0.17
NPHP4-208ENST00000478423 HAS3O00219 553 aa13.99□□□□□ -0.17
NPHP4-208ENST00000478423 PAPSS2O95340 614 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-208ENST00000478423 ENO2P09104 434 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms