RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 FAM189BP81408 668 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SLC25A3Q00325 362 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 TNFRSF17Q02223 184 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CDK18Q07002 472 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 GOLGA8FQ08AF8 430 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 GOLGA8DPQ0D2H9 430 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CALCOCO2Q13137 446 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SCGB2A2Q13296 93 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 UBXN2BQ14CS0 331 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 KARSQ15046 597 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SF3B4Q15427 424 aaKnown RBP eCLIP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 DECR1Q16698 335 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 HSP90AA4PQ58FG1 418 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 RAB41Q5JT25 222 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 COLEC12Q5KU26 742 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 THEMIS2Q5TEJ8 643 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 DAB2IPQ5VWQ8 1189 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 RRAGBQ5VZM2 374 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 NAPEPLDQ6IQ20 393 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 TMEM270Q6UE05 265 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 MED25Q71SY5 747 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 RRAGAQ7L523 313 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PTF1AQ7RTS3 328 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 EFL1Q7Z2Z2 1120 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 KRT27Q7Z3Y8 459 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 GDF7Q7Z4P5 450 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CPLX4Q7Z7G2 160 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 AMZ2Q86W34 360 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 RASAL3Q86YV0 1011 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 MB21D2Q8IYB1 491 aaPredicted RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PM20D2Q8IYS1 436 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 IQCKQ8N0W5 287 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ARHGAP18Q8N392 663 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ZNF276Q8N554 614 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ZNF781Q8N8C0 355 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 C11orf65Q8NCR3 313 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ICA1LQ8NDH6 482 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 RBM15BQ8NDT2 890 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 NSUN7Q8NE18 718 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 NLGN4YQ8NFZ3 816 aaPredicted RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 OR8J2Q8NGG1 315 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 AKR7LQ8NHP1 331 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PSMA8Q8TAA3 256 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 EXOC6Q8TAG9 804 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 METTL6Q8TCB7 284 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 LKAAEAR1Q8TD35 194 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ADAMTS16Q8TE57 1224 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CCDC12Q8WUD4 166 aaPredicted RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 STYXQ8WUJ0 223 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 MITD1Q8WV92 249 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 KCNE4Q8WWG9 221 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 DPF1Q92782 380 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SLAMF9Q96A28 289 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PRR11Q96HE9 360 aaPredicted RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ZNF479Q96JC4 524 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CEP170P1Q96L14 293 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SAMD8Q96LT4 415 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CCDC42Q96M95 316 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 TSNARE1Q96NA8 513 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 MED15Q96RN5 788 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 FIZ1Q96SL8 496 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 MYOCQ99972 504 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 RBM4BQ9BQ04 359 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 REEP2Q9BRK0 252 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 FUZQ9BT04 418 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ZNF747Q9BV97 191 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 RBM4Q9BWF3 364 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 APOL6Q9BWW8 343 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SLC46A2Q9BY10 475 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 TRIM31Q9BZY9 425 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 DERL2Q9GZP9 239 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SLC5A7Q9GZV3 580 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 EPB41L5Q9HCM4 733 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 C12orf4Q9NQ89 552 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 NECTIN3Q9NQS3 549 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 TLR8Q9NR97 1041 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 GIMAP4Q9NUV9 329 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ARMC1Q9NVT9 282 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 FBXO34Q9NWN3 711 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 MRPL39Q9NYK5 338 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 MRPL15Q9P015 296 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 IGSF9Q9P2J2 1179 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ANKMY1Q9P2S6 941 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CTSFQ9UBX1 484 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 RGS17Q9UGC6 210 aaPredicted RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PCDHA6Q9UN73 950 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SAMHD1Q9Y3Z3 626 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 FADS3Q9Y5Q0 445 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PUS1Q9Y606 427 aaKnown RBP eCLIP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 COPG1Q9Y678 874 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 RTEL1-TNFRSF6BF6WH68 1400 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 MYOM3Q5VTT5 1437 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 KIAA1217Q5T5P2 1943 aa3.48□□□□□ -1.85
FNDC3B-209ENST00000478016 NLRP1Q9C000 1473 aa3.48□□□□□ -1.85
FNDC3B-209ENST00000478016 SHANK2Q9UPX8 1470 aa3.48□□□□□ -1.85
FNDC3B-209ENST00000478016 NPHP4O75161 1426 aaPredicted RBP3.48□□□□□ -1.85
FNDC3B-209ENST00000478016 A0A1W2PQ09 198 aa3.48□□□□□ -1.85
FNDC3B-209ENST00000478016 TCRBV7S2A1N4TA0A589 114 aa3.48□□□□□ -1.85
FNDC3B-209ENST00000478016 GAGE12BA1L429 117 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms