RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 RIMKLBQ9ULI2 386 aa11.97□□□□□ -0.49
PTPN7-210ENST00000477625 CFAP20Q9Y6A4 193 aaKnown RBP11.97□□□□□ -0.49
PTPN7-210ENST00000477625 SMG1Q96Q15 3661 aaKnown RBP11.96□□□□□ -0.49
PTPN7-210ENST00000477625 CCDC162PA2VCL2 907 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 RASSF9O75901 435 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 AP2A2O94973 939 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 GSTM1P09488 218 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 NSG1P42857 185 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 GSTM4Q03013 218 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 ITIH4Q14624 930 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 GSE1Q14687 1217 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 DBN1Q16643 649 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 MANEAQ5SRI9 462 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 TSTD2Q5T7W7 516 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 LYPLAL1Q5VWZ2 237 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 LILRA3Q8N6C8 439 aaPredicted RBP11.96□□□□□ -0.49
PTPN7-210ENST00000477625 PRELID2Q8N945 189 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 LSM14AQ8ND56 463 aaKnown RBP11.96□□□□□ -0.49
PTPN7-210ENST00000477625 PEX13Q92968 403 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 HDAC10Q969S8 669 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 PBKQ96KB5 322 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 CTRCQ99895 268 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 ZPBPQ9BS86 351 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 ZNF768Q9H5H4 540 aaKnown RBP11.96□□□□□ -0.49
PTPN7-210ENST00000477625 SMARCAL1Q9NZC9 954 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 SLC2A6Q9UGQ3 507 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 COLEC10Q9Y6Z7 277 aa11.96□□□□□ -0.49
PTPN7-210ENST00000477625 MGAQ8IWI9 3026 aa11.96□□□□□ -0.5
PTPN7-210ENST00000477625 OR51F1A6NGY5 319 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 AP3B1O00203 1094 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 POLR1CO15160 346 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-210ENST00000477625 ATXN7O15265 892 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-210ENST00000477625 ZSCAN12O43309 604 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 KIF1CO43896 1103 aaKnown RBP11.95□□□□□ -0.5
PTPN7-210ENST00000477625 NDUFS1P28331 727 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 FOXN2P32314 431 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 SEPHS1P49903 392 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 BASP1P80723 227 aaKnown RBP11.95□□□□□ -0.5
PTPN7-210ENST00000477625 RHDQ02161 417 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 ACVR1Q04771 509 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 RPA4Q13156 261 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 KRT33BQ14525 404 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 PLCL1Q15111 1095 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 ZNF658BQ4V348 819 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-210ENST00000477625 PCID2Q5JVF3 399 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 CACHD1Q5VU97 1274 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 IRGCQ6NXR0 463 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 ZNF449Q6P9G9 518 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 CEACAM20Q6UY09 585 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 PACS1Q6VY07 963 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 CERS6Q6ZMG9 384 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 FAM92BQ6ZTR7 304 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 PRSS42Q7Z5A4 293 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 REXO1L1PQ8IX06 675 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 RASGEF1CQ8N431 466 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 OR4L1Q8NH43 312 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 JPH3Q8WXH2 748 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-210ENST00000477625 KLHL6Q8WZ60 621 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 NKD1Q969G9 470 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.95□□□□□ -0.5
PTPN7-210ENST00000477625 SGSM3Q96HU1 749 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 RMDN2Q96LZ7 410 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 ZNF778Q96MU6 729 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 TTC1Q99614 292 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 SPRY4Q9C004 299 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 KIR3DX1Q9H7L2 352 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 COG4Q9H9E3 785 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 CHRAC1Q9NRG0 131 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 SLC24A2Q9UI40 661 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 PILRAQ9UKJ1 303 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 TCAF1Q9Y4C2 921 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 HEBP2Q9Y5Z4 205 aa11.95□□□□□ -0.5
PTPN7-210ENST00000477625 ERVH48-1M5A8F1 160 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 TK2O00142 265 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 QSOX1O00391 747 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 IFRD1O00458 451 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-210ENST00000477625 GOT2P00505 430 aaKnown RBP11.94□□□□□ -0.5
PTPN7-210ENST00000477625 PDHA2P29803 388 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 CD151P48509 253 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 NPY2RP49146 381 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 ATP1A2P50993 1020 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 CDK16Q00536 496 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 FOXM1Q08050 763 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 SRSF6Q13247 344 aaKnown RBP11.94□□□□□ -0.5
PTPN7-210ENST00000477625 IL11RAQ14626 422 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 DUS1LQ6P1R4 473 aaKnown RBP11.94□□□□□ -0.5
PTPN7-210ENST00000477625 AFTPHQ6ULP2 937 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 VASH2Q86V25 355 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 PPHLN1Q8NEY8 458 aaKnown RBP11.94□□□□□ -0.5
PTPN7-210ENST00000477625 OR6P1Q8NGX9 317 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 MS4A14Q96JA4 679 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 IL22Q9GZX6 179 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 OR52A5Q9H2C5 316 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 APMAPQ9HDC9 416 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 HRASLS2Q9NWW9 162 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 SIDT1Q9NXL6 827 aaKnown RBP11.94□□□□□ -0.5
PTPN7-210ENST00000477625 SEMA5BQ9P283 1151 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 TTC7AQ9ULT0 858 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-210ENST00000477625 PRSS21Q9Y6M0 314 aa11.94□□□□□ -0.5
PTPN7-210ENST00000477625 OR6C74A6NCV1 312 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms