RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 HOMER3Q9NSC5 361 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 KLHL3Q9UH77 587 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 E7EVH7 732 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 AP2A2O94973 939 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 MSNP26038 577 aaKnown RBP21.25■□□□□ 0.99
COL9A3-211ENST00000477612 NSG1P42857 185 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 LEPRP48357 1165 aaKnown RBP21.25■□□□□ 0.99
COL9A3-211ENST00000477612 DBN1Q16643 649 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 MANEAQ5SRI9 462 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 TSTD2Q5T7W7 516 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 KLHL35Q6PF15 583 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 PPP1R21Q6ZMI0 780 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 MICALCLQ6ZW33 695 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 LILRA3Q8N6C8 439 aaPredicted RBP21.25■□□□□ 0.99
COL9A3-211ENST00000477612 SPDYE1Q8NFV5 336 aaPredicted RBP21.25■□□□□ 0.99
COL9A3-211ENST00000477612 C12orf66Q96MD2 445 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 COG4Q9H9E3 785 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 GRPEL1Q9HAV7 217 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 IMP3Q9NV31 184 aaKnown RBP21.25■□□□□ 0.99
COL9A3-211ENST00000477612 PILRAQ9UKJ1 303 aa21.25■□□□□ 0.99
COL9A3-211ENST00000477612 CEP104O60308 925 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 APRTP07741 180 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 SLC35G4P0C7Q5 338 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 ZSCAN5DPP0CG00 497 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 CD151P48509 253 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 LMAN1P49257 510 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 RPA4Q13156 261 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 SRSF6Q13247 344 aaKnown RBP21.24■□□□□ 0.99
COL9A3-211ENST00000477612 CCDC38Q502W7 563 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 PACS1Q6VY07 963 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 NLRP9Q7RTR0 991 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 TAS2R42Q7RTR8 314 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 SLC39A7Q92504 469 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 RMDN2Q96LZ7 410 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 OR52A5Q9H2C5 316 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 KIR3DX1Q9H7L2 352 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 VPS37BQ9H9H4 285 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 APMAPQ9HDC9 416 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 SLC24A2Q9UI40 661 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 TMEM184BQ9Y519 407 aaPredicted RBP21.24■□□□□ 0.99
COL9A3-211ENST00000477612 HEBP2Q9Y5Z4 205 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 CFAP20Q9Y6A4 193 aaKnown RBP21.24■□□□□ 0.99
COL9A3-211ENST00000477612 COLEC10Q9Y6Z7 277 aa21.24■□□□□ 0.99
COL9A3-211ENST00000477612 CCDC162PA2VCL2 907 aa21.23■□□□□ 0.99
COL9A3-211ENST00000477612 QSOX1O00391 747 aa21.23■□□□□ 0.99
COL9A3-211ENST00000477612 NDUFS1P28331 727 aa21.23■□□□□ 0.99
COL9A3-211ENST00000477612 ATP1A2P50993 1020 aa21.23■□□□□ 0.99
COL9A3-211ENST00000477612 RASGEF1CQ8N431 466 aa21.23■□□□□ 0.99
COL9A3-211ENST00000477612 CLDN19Q8N6F1 224 aa21.23■□□□□ 0.99
COL9A3-211ENST00000477612 ZNF778Q96MU6 729 aa21.23■□□□□ 0.99
COL9A3-211ENST00000477612 JRKLQ9Y4A0 524 aa21.23■□□□□ 0.99
COL9A3-211ENST00000477612 TCAF1Q9Y4C2 921 aa21.23■□□□□ 0.99
COL9A3-211ENST00000477612 OR5K3A6NET4 321 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 POLR1CO15160 346 aaPredicted RBP21.22■□□□□ 0.99
COL9A3-211ENST00000477612 KIF1CO43896 1103 aaKnown RBP21.22■□□□□ 0.99
COL9A3-211ENST00000477612 POLBP06746 335 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 CXCR5P32302 372 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 KCNJ1P48048 391 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 CACHD1Q5VU97 1274 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 LYPLAL1Q5VWZ2 237 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 DUS1LQ6P1R4 473 aaKnown RBP21.22■□□□□ 0.99
COL9A3-211ENST00000477612 PRELID2Q8N945 189 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 UBXN4Q92575 508 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 HDAC10Q969S8 669 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 CD180Q99467 661 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 CTRCQ99895 268 aa21.22■□□□□ 0.99
COL9A3-211ENST00000477612 TTC7AQ9ULT0 858 aaPredicted RBP21.22■□□□□ 0.99
COL9A3-211ENST00000477612 CCDC78A2IDD5 438 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 OR51F1A6NGY5 319 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 AP3B1O00203 1094 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 RAD1O60671 282 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 DLGAP3O95886 979 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 GOT2P00505 430 aaKnown RBP21.21■□□□□ 0.99
COL9A3-211ENST00000477612 NELFEP18615 380 aaKnown RBP21.21■□□□□ 0.99
COL9A3-211ENST00000477612 WT1P19544 449 aaPredicted RBP21.21■□□□□ 0.99
COL9A3-211ENST00000477612 MAP7Q14244 749 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 IL11RAQ14626 422 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 PCID2Q5JVF3 399 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 IRGCQ6NXR0 463 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 AFTPHQ6ULP2 937 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 CERS6Q6ZMG9 384 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 VASH2Q86V25 355 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 REXO1L1PQ8IX06 675 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 CACNA2D3Q8IZS8 1091 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 SLC41A2Q96JW4 573 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 SMARCAL1Q9NZC9 954 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 FAM8A1Q9UBU6 413 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 SLC2A6Q9UGQ3 507 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 PRSS21Q9Y6M0 314 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 KALRNO60229 2985 aa21.21■□□□□ 0.99
COL9A3-211ENST00000477612 GOLGA6L3A6NEY3 463 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 RASSF9O75901 435 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 MAP4P27816 1152 aaKnown RBP21.2■□□□□ 0.98
COL9A3-211ENST00000477612 SEPHS1P49903 392 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 PPP1CAP62136 330 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 CDK16Q00536 496 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 GSE1Q14687 1217 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 PLCL1Q15111 1095 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 FAM92BQ6ZTR7 304 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 ZNF534Q76KX8 674 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms