RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 NT5MQ9NPB1 228 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 AKIP1Q9NQ31 210 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 PRSS16Q9NQE7 514 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 ZSCAN32Q9NX65 697 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 RSPH14Q9UHP6 348 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 ZNHIT2Q9UHR6 403 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 PRSS50Q9UI38 385 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 SLCO3A1Q9UIG8 710 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 GMEB2Q9UKD1 530 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 INTS6Q9UL03 887 aaKnown RBP4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 CLEC4EQ9ULY5 219 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 AAR2Q9Y312 384 aaKnown RBP4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 PCDHGA2Q9Y5H1 932 aa4.52□□□□□ -1.69
NSMCE4A-208ENST00000477289 TBC1D3DA0A087WVF3 549 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TBC1D3IA0A087WXS9 549 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TBC1D3EA0A087X179 549 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TBC1D3KA0A087X1G2 549 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TBC1D3FA6NER0 549 aaPredicted RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 FAM47DPA6NHR8 397 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 C3orf70A6NLC5 250 aaPredicted RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 PRR5-ARHGAP8B1AHC4 643 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TBC1D3LB9A6J9 549 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 WASH3PC4AMC7 463 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 CCDC188H7C350 402 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 I6L893 689 aaPredicted RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 J3KR12 359 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 INSIG1O15503 277 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 KCNN4O15554 427 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 SLC7A4O43246 635 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 MAGEC1O60732 1142 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TMEM127O75204 238 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 RPP40O75818 363 aaKnown RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 IFNB1P01574 187 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 JCHAINP01591 159 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TBC1D3HP0C7X1 549 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 GNSP15586 552 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 GABRG2P18507 467 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 IL4RP24394 825 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 PRKCHP24723 683 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 CD6P30203 668 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 LSP1P33241 339 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 NUDT1P36639 197 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 CSNK1DP48730 415 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 CLK3P49761 638 aaKnown RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 STK19P49842 368 aaPredicted RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 GEMP55040 296 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 C21orf58P58505 322 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 ARF5P84085 180 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 OTUD4Q01804 1114 aaKnown RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 SATB1Q01826 763 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 NHLH2Q02577 135 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 GBE1Q04446 702 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 PPIDQ08752 370 aaKnown RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 SGCGQ13326 291 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 LAMB3Q13751 1172 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 ENPP2Q13822 863 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 ARHGEF7Q14155 803 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 SIM2Q14190 667 aaPredicted RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 NOMO1Q15155 1222 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 PPP1R7Q15435 360 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 CST6Q15828 149 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 CCNG2Q16589 344 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 BEAN1Q3B7T3 259 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TEX44Q53QW1 395 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 ZNF805Q5CZA5 627 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 WDR45BQ5MNZ6 344 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 ARMC12Q5T9G4 340 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TMEM215Q68D42 235 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TBC1D3GQ6DHY5 549 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TBC1D3CQ6IPX1 549 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 BRAT1Q6PJG6 821 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 DPY19L3Q6ZPD9 716 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 ERN2Q76MJ5 926 aaKnown RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 SRLQ86TD4 932 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 LINC00523Q86TU6 105 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TTC7BQ86TV6 843 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 PRPF39Q86UA1 669 aaKnown RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 SLC13A5Q86YT5 568 aaPredicted RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 TBC1D3Q8IZP1 549 aaPredicted RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 STK40Q8N2I9 435 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 HDDC3Q8N4P3 179 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 PQLC3Q8N755 202 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 ZNF366Q8N895 744 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 OR14C36Q8NHC7 312 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 ACTL9Q8TC94 416 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 HCAR2Q8TDS4 363 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 CXorf40AQ8TE69 158 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 FATE1Q969F0 183 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 MAGOHBQ96A72 148 aaKnown RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 RMDN1Q96DB5 314 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 ERLEC1Q96DZ1 483 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 ALG14Q96F25 216 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 P2RY11Q96G91 374 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 FEM1CQ96JP0 617 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 C16orf45Q96MC5 204 aaPredicted RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 KLHL32Q96NJ5 620 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 AGAP3Q96P47 875 aa4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 BBC3Q96PG8 261 aaPredicted RBP4.51□□□□□ -1.69
NSMCE4A-208ENST00000477289 QKIQ96PU8 341 aaKnown RBP eCLIP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms