RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 SCN5AQ14524 2016 aa4.71□□□□□ -1.66
PTCD3-211ENST00000476215 CC2D2AQ9P2K1 1620 aa4.71□□□□□ -1.66
PTCD3-211ENST00000476215 A0A0G2JNG1 304 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 TO15178 435 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 SYNGR3O43761 229 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 XPNPEP2O43895 674 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 GCNT3O95395 438 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 ADRB2P07550 413 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 ABCB1P08183 1280 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-211ENST00000476215 PSMC4P43686 418 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 KIR2DS5Q14953 304 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 ASPRV1Q53RT3 343 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 FAM76BQ5HYJ3 339 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 TEX38Q6PEX7 206 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 PACS1Q6VY07 963 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 GDPD4Q6W3E5 623 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 NR2C2APQ86WQ0 139 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 PTOV1Q86YD1 416 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 OR8H2Q8N162 312 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 AFAP1Q8N556 730 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 DMBX1Q8NFW5 382 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 TAS1R2Q8TE23 839 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 ZFAND2BQ8WV99 257 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 PRMT6Q96LA8 375 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-211ENST00000476215 SLC35C2Q9NQQ7 365 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 CLIC5Q9NZA1 410 aa4.7□□□□□ -1.66
PTCD3-211ENST00000476215 WBP11Q9Y2W2 641 aaKnown RBP4.7□□□□□ -1.66
PTCD3-211ENST00000476215 EIF4G1Q04637 1599 aaKnown RBP4.7□□□□□ -1.66
PTCD3-211ENST00000476215 TCF20Q9UGU0 1960 aaKnown RBP4.69□□□□□ -1.66
PTCD3-211ENST00000476215 SYNDIG1LA6NDD5 238 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 GPR137BO60478 399 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 KRT36O76013 467 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 PDE9AO76083 593 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 CRYAAP02489 173 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 HSP90AA1P07900 732 aaKnown RBP4.69□□□□□ -1.66
PTCD3-211ENST00000476215 GABRA5P31644 462 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 HOXA1P49639 335 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-211ENST00000476215 MMP15P51511 669 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 DLX5P56178 289 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 ARL16Q0P5N6 197 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 GAGE5Q13069 117 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 GAGE6Q13070 117 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 PRPF4BQ13523 1007 aaKnown RBP4.69□□□□□ -1.66
PTCD3-211ENST00000476215 DUOXA1Q1HG43 343 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 TMEM266Q2M3C6 531 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 FAM109BQ6ICB4 259 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-211ENST00000476215 TMEM211Q6ICI0 200 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 NAA16Q6N069 864 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-211ENST00000476215 KLC3Q6P597 504 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 ADIPOR2Q86V24 386 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 LSMEM1Q8N8F7 131 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 POMGNT2Q8NAT1 580 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 MTERF3Q96E29 417 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 DGAT2Q96PD7 388 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 NEK1Q96PY6 1258 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 OR6C1Q96RD1 312 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 SLX1AQ9BQ83 275 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 C16orf70Q9BSU1 422 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 CCDC106Q9BWC9 280 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 TAB2Q9NYJ8 693 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 TAAR2Q9P1P5 351 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 KCNG2Q9UJ96 466 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 ZNF112Q9UJU3 913 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 ICAM5Q9UMF0 924 aa4.69□□□□□ -1.66
PTCD3-211ENST00000476215 ASTN2O75129 1339 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-211ENST00000476215 IGLV5-45A0A087WSX0 123 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 PRSS51A0A1B0GVH4 220 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 IPO8O15397 1037 aaKnown RBP4.68□□□□□ -1.66
PTCD3-211ENST00000476215 XRCC3O43542 346 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 CTSVO60911 334 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 BAG4O95429 457 aaKnown RBP4.68□□□□□ -1.66
PTCD3-211ENST00000476215 LDLRP01130 860 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 IL11P20809 199 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 DNASE1P24855 282 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-211ENST00000476215 MBTD1Q05BQ5 628 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 PRKAA1Q13131 559 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 ZRSR1Q15695 479 aaKnown RBP4.68□□□□□ -1.66
PTCD3-211ENST00000476215 ACCSLQ4AC99 568 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 FIGLAQ6QHK4 219 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 POGLUT1Q8NBL1 392 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 SLC24A4Q8NFF2 622 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 DAZLQ92904 295 aaKnown RBP4.68□□□□□ -1.66
PTCD3-211ENST00000476215 EPYCQ99645 322 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 MOV10L1Q9BXT6 1211 aaKnown RBP4.68□□□□□ -1.66
PTCD3-211ENST00000476215 UPF2Q9HAU5 1272 aaKnown RBP4.68□□□□□ -1.66
PTCD3-211ENST00000476215 SLC38A7Q9NVC3 462 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 GDE1Q9NZC3 331 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 PTTG2Q9NZH5 202 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 NPAP1Q9NZP6 1156 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 RHCGQ9UBD6 479 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 TRPV2Q9Y5S1 764 aa4.68□□□□□ -1.66
PTCD3-211ENST00000476215 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 TEX13DA0A0J9YY54 714 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-211ENST00000476215 IFITM10A6NMD0 228 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 SYNCRIPO60506 623 aaKnown RBP4.67□□□□□ -1.66
PTCD3-211ENST00000476215 CSPG5O95196 566 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 IGHV4-39P01824 125 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 H1F0P07305 194 aaKnown RBP4.67□□□□□ -1.66
PTCD3-211ENST00000476215 CKMT2P17540 419 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms