RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 TMEM164Q5U3C3 297 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 ZNF534Q76KX8 674 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 DTX1Q86Y01 620 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 COG1Q8WTW3 980 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 BBC3Q96PG8 261 aaPredicted RBP20.68■□□□□ 0.9
LIME1-204ENST00000476183 CCM2Q9BSQ5 444 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 AP1M1Q9BXS5 423 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 COG4Q9H9E3 785 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 TTC7AQ9ULT0 858 aaPredicted RBP20.68■□□□□ 0.9
LIME1-204ENST00000476183 ATMQ13315 3056 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 EFSO43281 561 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 ZSCAN12O43309 604 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 KIF1CO43896 1103 aaKnown RBP20.67■□□□□ 0.9
LIME1-204ENST00000476183 ANKRD34CP0C6C1 535 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 SLC35G4P0C7Q5 338 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 CRADDP78560 199 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 MC2RQ01718 297 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 LAMB3Q13751 1172 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 ITIH4Q14624 930 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 ARHGAP40Q5TG30 622 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 ANKS6Q68DC2 871 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 GPR155Q7Z3F1 870 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 PDLIM2Q96JY6 352 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 CTRCQ99895 268 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 DDA1Q9BW61 102 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 OR52A5Q9H2C5 316 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 CHRAC1Q9NRG0 131 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 WDR70Q9NW82 654 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 EPHA6Q9UF33 1036 aa20.67■□□□□ 0.9
LIME1-204ENST00000476183 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.66■□□□□ 0.9
LIME1-204ENST00000476183 OR1I1O60431 355 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 AP2A2O94973 939 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 CD82P27701 267 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 PDHA2P29803 388 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 NSG1P42857 185 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 VPS41P49754 854 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 TERF1P54274 439 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 SEMA3AQ14563 771 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 SOWAHCQ53LP3 525 aaPredicted RBP20.66■□□□□ 0.9
LIME1-204ENST00000476183 PCID2Q5JVF3 399 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 AFTPHQ6ULP2 937 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 PACS1Q6VY07 963 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 NLRP9Q7RTR0 991 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 PPHLN1Q8NEY8 458 aaKnown RBP20.66■□□□□ 0.9
LIME1-204ENST00000476183 MAGOHBQ96A72 148 aaKnown RBP20.66■□□□□ 0.9
LIME1-204ENST00000476183 CCNL2Q96S94 520 aaPredicted RBP20.66■□□□□ 0.9
LIME1-204ENST00000476183 OSBPL9Q96SU4 736 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 APMAPQ9HDC9 416 aa20.66■□□□□ 0.9
LIME1-204ENST00000476183 SIDT1Q9NXL6 827 aaKnown RBP20.66■□□□□ 0.9
LIME1-204ENST00000476183 USP27XA6NNY8 438 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 TPSB2P20231 275 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 PREPP48147 710 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 SEPHS1P49903 392 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 VAC14Q08AM6 782 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 PLCL1Q15111 1095 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 TPSAB1Q15661 275 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 CYP1B1Q16678 543 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 DCAF12Q5T6F0 453 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 IRGCQ6NXR0 463 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 FAM92BQ6ZTR7 304 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 PRSS42Q7Z5A4 293 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 VASH2Q86V25 355 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 OR6P1Q8NGX9 317 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 OR4L1Q8NH43 312 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 SNRNP27Q8WVK2 155 aaKnown RBP20.65■□□□□ 0.9
LIME1-204ENST00000476183 RAB33BQ9H082 229 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 KIR3DX1Q9H7L2 352 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 VPS37BQ9H9H4 285 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 SLC24A2Q9UI40 661 aa20.65■□□□□ 0.9
LIME1-204ENST00000476183 ATRXP46100 2492 aa20.64■□□□□ 0.9
LIME1-204ENST00000476183 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.64■□□□□ 0.89
LIME1-204ENST00000476183 STMND1H3BQB6 276 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 K7ENP7 123 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 TOX3O15405 576 aaPredicted RBP20.64■□□□□ 0.89
LIME1-204ENST00000476183 KRT14P02533 472 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 COILP38432 576 aaPredicted RBP20.64■□□□□ 0.89
LIME1-204ENST00000476183 RAB15P59190 212 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 GPS1Q13098 491 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 KCNJ11Q14654 390 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 GSE1Q14687 1217 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 LRRC8BQ6P9F7 803 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 INO80CQ6PI98 192 aaPredicted RBP20.64■□□□□ 0.89
LIME1-204ENST00000476183 CCDC81Q6ZN84 652 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 ZFPM2Q8WW38 1151 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 PEX13Q92968 403 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.64■□□□□ 0.89
LIME1-204ENST00000476183 ZDHHC12Q96GR4 267 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 SGSM3Q96HU1 749 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 ASPSCR1Q9BZE9 553 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 IL22Q9GZX6 179 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 ZNF768Q9H5H4 540 aaKnown RBP20.64■□□□□ 0.89
LIME1-204ENST00000476183 FBXO8Q9NRD0 319 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 TREX1Q9NSU2 369 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 NEU2Q9Y3R4 380 aa20.64■□□□□ 0.89
LIME1-204ENST00000476183 OR5K3A6NET4 321 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 PGRMC1O00264 195 aaKnown RBP20.63■□□□□ 0.89
LIME1-204ENST00000476183 ZNF185O15231 689 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 KIF5CO60282 957 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 RASSF9O75901 435 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 MGAT1P26572 445 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms