RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 PBLDP30039 288 aaPredicted RBP15.25■□□□□ 0.03
SRRT-209ENST00000474896 CD68P34810 354 aaPredicted RBP15.25■□□□□ 0.03
SRRT-209ENST00000474896 SPAM1P38567 509 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 WNT3AP56704 352 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 TUBB4BP68371 445 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 XRCC4Q13426 336 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 LAMB3Q13751 1172 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 TUBB2AQ13885 445 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 GPR19Q15760 415 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 PPP2R5EQ16537 467 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 SIRPB2Q5JXA9 342 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 ZDHHC20Q5W0Z9 365 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 METRNLQ641Q3 311 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 C11orf63Q6NUN7 778 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 TMEM126BQ8IUX1 230 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 DTX3LQ8TDB6 740 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 INSM2Q96T92 566 aaPredicted RBP15.25■□□□□ 0.03
SRRT-209ENST00000474896 CD180Q99467 661 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 TUBB2BQ9BVA1 445 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 ZCCHC2Q9C0B9 1178 aaKnown RBP15.25■□□□□ 0.03
SRRT-209ENST00000474896 GOLPH3Q9H4A6 298 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 TRABDQ9H4I3 376 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 MLXIPLQ9NP71 852 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 IMP3Q9NV31 184 aaKnown RBP15.25■□□□□ 0.03
SRRT-209ENST00000474896 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.25■□□□□ 0.03
SRRT-209ENST00000474896 IL17CQ9P0M4 197 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 SAE1Q9UBE0 346 aaPredicted RBP15.25■□□□□ 0.03
SRRT-209ENST00000474896 GUCA1BQ9UMX6 200 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 MAP4K5Q9Y4K4 846 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 PCDHGA9Q9Y5G4 932 aaKnown RBP15.25■□□□□ 0.03
SRRT-209ENST00000474896 ESPL1Q14674 2120 aa15.25■□□□□ 0.03
SRRT-209ENST00000474896 OR6C74A6NCV1 312 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 BUD23O43709 281 aaKnown RBP15.24■□□□□ 0.03
SRRT-209ENST00000474896 CPNE3O75131 537 aaKnown RBP15.24■□□□□ 0.03
SRRT-209ENST00000474896 KRT1P04264 644 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 KLK3P07288 261 aaPredicted RBP15.24■□□□□ 0.03
SRRT-209ENST00000474896 MTHFD1P11586 935 aaKnown RBP15.24■□□□□ 0.03
SRRT-209ENST00000474896 TNNT1P13805 278 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 LPOP22079 712 aaPredicted RBP15.24■□□□□ 0.03
SRRT-209ENST00000474896 CHRNA4P43681 627 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 GPS2Q13227 327 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 ODF2Q5BJF6 829 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 GPRC6AQ5T6X5 926 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 ARMC6Q6NXE6 501 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 KDELC1Q6UW63 502 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 RNF10Q8N5U6 811 aaKnown RBP15.24■□□□□ 0.03
SRRT-209ENST00000474896 BEND7Q8N7W2 519 aaPredicted RBP15.24■□□□□ 0.03
SRRT-209ENST00000474896 SLC38A9Q8NBW4 561 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 DDHD1Q8NEL9 900 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 BLOC1S5Q8TDH9 187 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 ZNF501Q96CX3 271 aaPredicted RBP15.24■□□□□ 0.03
SRRT-209ENST00000474896 WWP1Q9H0M0 922 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 CHST8Q9H2A9 424 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 HYOU1Q9Y4L1 999 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 ALG6Q9Y672 507 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 CAPN6Q9Y6Q1 641 aa15.24■□□□□ 0.03
SRRT-209ENST00000474896 SPTBP11277 2137 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 NOTCH2Q04721 2471 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 GLYATL1P3A0A0U1RQE8 302 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 GRID2IPA4D2P6 1211 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 F5H423 210 aaPredicted RBP15.23■□□□□ 0.03
SRRT-209ENST00000474896 SEMA7AO75326 666 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 ZBTB11O95625 1053 aaPredicted RBP15.23■□□□□ 0.03
SRRT-209ENST00000474896 EPOP01588 193 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 MSH3P20585 1137 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 COMTP21964 271 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 SLC1A1P43005 524 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 TNNT3P45378 269 aaPredicted RBP15.23■□□□□ 0.03
SRRT-209ENST00000474896 ARCN1P48444 511 aaKnown RBP15.23■□□□□ 0.03
SRRT-209ENST00000474896 WASHC5Q12768 1159 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 PRKD1Q15139 912 aaPredicted RBP15.23■□□□□ 0.03
SRRT-209ENST00000474896 FNBP1LQ5T0N5 605 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 TMTC4Q5T4D3 741 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 PRAMEF17Q5VTA0 474 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 IZUMO3Q5VZ72 239 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 PAPD7Q5XG87 772 aaKnown RBP15.23■□□□□ 0.03
SRRT-209ENST00000474896 LCN10Q6JVE6 187 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 FBXO38Q6PIJ6 1188 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 ZNF517Q6ZMY9 492 aaPredicted RBP15.23■□□□□ 0.03
SRRT-209ENST00000474896 BZW1Q7L1Q6 419 aaKnown RBP15.23■□□□□ 0.03
SRRT-209ENST00000474896 DET1Q7L5Y6 550 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 GLT6D1Q7Z4J2 308 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 DAAM2Q86T65 1068 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 OOSP2Q86WS3 158 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 REXO1L1PQ8IX06 675 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 LRRC57Q8N9N7 239 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 OR8K5Q8NH50 307 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 SSC4DQ8WTU2 575 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 TFB1MQ8WVM0 346 aaKnown RBP15.23■□□□□ 0.03
SRRT-209ENST00000474896 ZFPM2Q8WW38 1151 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 MRGPRX2Q96LB1 330 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 C12orf66Q96MD2 445 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 PPM1MQ96MI6 270 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 TRMT1Q9NXH9 659 aaKnown RBP15.23■□□□□ 0.03
SRRT-209ENST00000474896 HACD3Q9P035 362 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 PKP3Q9Y446 797 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 TEX15Q9BXT5 2789 aa15.23■□□□□ 0.03
SRRT-209ENST00000474896 MGAT4DA6NG13 374 aa15.22■□□□□ 0.03
SRRT-209ENST00000474896 GAPDHSO14556 408 aaPredicted RBP15.22■□□□□ 0.03
SRRT-209ENST00000474896 DDX3YO15523 660 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms