RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 CHST15Q7LFX5 561 aaPredicted RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 GSTA5Q7RTV2 222 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 CCDC28AQ8IWP9 274 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ZNF280CQ8ND82 737 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 PSMA8Q8TAA3 256 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ADAM32Q8TC27 787 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 UFD1Q92890 307 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 TRIM63Q969Q1 353 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 THAP11Q96EK4 314 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 SCMH1Q96GD3 660 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 DMRTA2Q96SC8 542 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ELOVL4Q9GZR5 314 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 KCNH6Q9H252 994 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 LDAHQ9H6V9 325 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ENTPD7Q9NQZ7 604 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 DCAF13Q9NV06 445 aaKnown RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 RBM22Q9NW64 420 aaKnown RBP eCLIP4.04□□□□□ -1.76
USP16-205ENST00000474835 SLC25A37Q9NYZ2 338 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 POLLQ9UGP5 575 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 MKL2Q9ULH7 1088 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 VPS9D1Q9Y2B5 631 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 NDUFAF1Q9Y375 327 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 PCDHGA6Q9Y5G7 932 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 TTC3P53804 2025 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 EVPLQ92817 2033 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 WDR27A2RRH5 827 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 CCDC154A6NI56 674 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 SAC3D1A6NKF1 404 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 TRPC5OSA6NMA1 111 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 A8MT66 165 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 KATNA1O75449 491 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 NDUFB10O96000 172 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ALBP02768 609 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 NR3C2P08235 984 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 MSX2P35548 267 aaPredicted RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 DCTP40126 519 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 DAPP51397 102 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 NKX2-5P52952 324 aaPredicted RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 CDH8P55286 799 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 SLC13A2Q13183 592 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 SLAMF1Q13291 335 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 BAK1Q16611 211 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ZNF404Q494X3 552 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 LIN9Q5TKA1 542 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 TEX261Q6UWH6 196 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 NECAB2Q7Z6G3 386 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 RNF180Q86T96 592 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 KLHDC8AQ8IYD2 350 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 RBFAQ8N0V3 343 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 AFAP1L2Q8N4X5 818 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 DHRSXQ8N5I4 330 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 TRIML2Q8N7C3 387 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ARIH2OSQ8N7S6 290 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 OR2T11Q8NH01 316 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 SPATA18Q8TC71 538 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 PROKR1Q8TCW9 393 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 FRS2Q8WU20 508 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ZC3H15Q8WU90 426 aaKnown RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 AP2M1Q96CW1 435 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 TNIP3Q96KP6 325 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 TMEM74Q96NL1 305 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 OR5M11Q96RB7 305 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 RHNO1Q9BSD3 238 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ROGDIQ9GZN7 287 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 GGA3Q9NZ52 723 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 TRPM5Q9NZQ8 1165 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 MUTYHQ9UIF7 546 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 UTS2RQ9UKP6 389 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ARIH1Q9Y4X5 557 aaPredicted RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 U3KQ87 197 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 CCDC195A0A1B0GUA6 201 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 BLOC1S5-TXNDC5H3BN57 136 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 GOLGA8SH3BPF8 625 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 SGK1O00141 431 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 TK2O00142 265 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 SOAT2O75908 522 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 ARHGEF15O94989 841 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 CSPG5O95196 566 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 NFATC1O95644 943 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 RAP2AP10114 183 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 THRBP10828 461 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 LAG3P18627 525 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 FDXRP22570 491 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 LMO1P25800 156 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 YWHABP31946 246 aaKnown RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 NOS2P35228 1153 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 HMGA2P52926 109 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 SRSF4Q08170 494 aaKnown RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 VAC14Q08AM6 782 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 RALGDSQ12967 914 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 STX5Q13190 355 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 EIF4HQ15056 248 aaKnown RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 PCSK7Q16549 785 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 FAM83EQ2M2I3 478 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 C15orf59Q2T9L4 293 aaPredicted RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 ZMAT1Q5H9K5 638 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 MAP1SQ66K74 1059 aaPredicted RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 RGS7BPQ6MZT1 257 aaPredicted RBP4.04□□□□□ -1.76
USP16-205ENST00000474835 CATSPERGQ6ZRH7 1159 aa4.04□□□□□ -1.76
USP16-205ENST00000474835 PRICKLE2Q7Z3G6 844 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms