RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KRT222Q8N1A0 295 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 GALNT15Q8N3T1 639 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 LILRA3Q8N6C8 439 aaPredicted RBP12.16□□□□□ -0.46
DDX56-209ENST00000473924 WDR48Q8TAF3 677 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 GSDMBQ8TAX9 411 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 LPGAT1Q92604 370 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 TMEM159Q96B96 161 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 C12orf66Q96MD2 445 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 RHOXF2Q9BQY4 288 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 WDR83Q9BRX9 315 aaKnown RBP12.16□□□□□ -0.46
DDX56-209ENST00000473924 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.16□□□□□ -0.46
DDX56-209ENST00000473924 FAM129AQ9BZQ8 928 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 PHACTR1Q9C0D0 580 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 ZMYND15Q9H091 742 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 POT1Q9NUX5 634 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 IMP3Q9NV31 184 aaKnown RBP12.16□□□□□ -0.46
DDX56-209ENST00000473924 KCNK4Q9NYG8 393 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 ZFATQ9P243 1243 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 ZNF624Q9P2J8 865 aaPredicted RBP12.16□□□□□ -0.46
DDX56-209ENST00000473924 RABGEF1Q9UJ41 708 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 KPNA5O15131 536 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 HYAL3O43820 417 aaPredicted RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 S1PR4O95977 384 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 ESR1P03372 595 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 APOA4P06727 396 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 ADRB1P08588 477 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 F7P08709 466 aaPredicted RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 PKMP14618 531 aaKnown RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 JUPP14923 745 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 CHRM3P20309 590 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 CCR7P32248 378 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 SLC19A1P41440 591 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 MAGEA4P43358 317 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 GPR3P46089 330 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 PREPP48147 710 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 CSE1LP55060 971 aaKnown RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 ADARP55265 1226 aaKnown RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 OR1D5P58170 312 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 CCL7P80098 99 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 MPP1Q00013 466 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 INSM1Q01101 510 aaPredicted RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 PLOD1Q02809 727 aaPredicted RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 HSPA14Q0VDF9 509 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 SPIDRQ14159 915 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 RPE65Q16518 533 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 AMZ1Q400G9 498 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 ZNF789Q5FWF6 425 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 CTSL3PQ5NE16 218 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 HES3Q5TGS1 186 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 TRMT10BQ6PF06 316 aaKnown RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 NAPRTQ6XQN6 538 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 OTOAQ7RTW8 1153 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 ZNF438Q7Z4V0 828 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 SPRED1Q7Z699 444 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 RAB44Q7Z6P3 723 aaPredicted RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 ZNF761Q86XN6 746 aaPredicted RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 IFT20Q8IY31 132 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 C2CD4AQ8NCU7 369 aaPredicted RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 ASZ1Q8WWH4 475 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 AHCYL2Q96HN2 611 aaKnown RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 C9orf72Q96LT7 481 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 BIRC8Q96P09 236 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 GFM1Q96RP9 751 aaKnown RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 INSM2Q96T92 566 aaPredicted RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 LRRN3Q9H3W5 708 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 PLAC1Q9HBJ0 212 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 ZDHHC18Q9NUE0 388 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 CFAP20Q9Y6A4 193 aaKnown RBP12.15□□□□□ -0.46
DDX56-209ENST00000473924 PIKFYVEQ9Y2I7 2098 aa12.15□□□□□ -0.46
DDX56-209ENST00000473924 DCHS1Q96JQ0 3298 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 NIPSNAP2O75323 286 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 HAUS5O94927 633 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 MTHFD1P11586 935 aaKnown RBP12.14□□□□□ -0.47
DDX56-209ENST00000473924 PDHA2P29803 388 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 SSTR1P30872 391 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 MAPK9P45984 424 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 LEPRP48357 1165 aaKnown RBP12.14□□□□□ -0.47
DDX56-209ENST00000473924 CLDN6P56747 220 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 UBE2IP63279 158 aaKnown RBP12.14□□□□□ -0.47
DDX56-209ENST00000473924 MGAT5Q09328 741 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 CUL1Q13616 776 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 FRG1Q14331 258 aaKnown RBP12.14□□□□□ -0.47
DDX56-209ENST00000473924 NR1D2Q14995 579 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 TEX35Q5T0J7 233 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 TEDDM1Q5T9Z0 273 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 CNSTQ6PJW8 725 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 KIAA0408Q6ZU52 694 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 C3orf62Q6ZUJ4 267 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 TMPRSS12Q86WS5 348 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 CNTN4Q8IWV2 1026 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 RBM12BQ8IXT5 1001 aaKnown RBP12.14□□□□□ -0.47
DDX56-209ENST00000473924 OR10G6Q8NH81 332 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 LKAAEAR1Q8TD35 194 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 FAM136AQ96C01 138 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 RMDN2Q96LZ7 410 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 FMO2Q99518 471 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 TSPYL1Q9H0U9 437 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 OR52A5Q9H2C5 316 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms