RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 LYPLAL1Q5VWZ2 237 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 CAPRIN2Q6IMN6 1127 aaKnown RBP18.51■□□□□ 0.55
PTCD3-210ENST00000473829 WDR74Q6RFH5 385 aaPredicted RBP18.51■□□□□ 0.55
PTCD3-210ENST00000473829 NAPRTQ6XQN6 538 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 CERS6Q6ZMG9 384 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 PPIL6Q8IXY8 311 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 LSMEM2Q8N112 164 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 LKAAEAR1Q8TD35 194 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 ZNF578Q96N58 590 aaPredicted RBP18.51■□□□□ 0.55
PTCD3-210ENST00000473829 DPYSL5Q9BPU6 564 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 OR52A5Q9H2C5 316 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 XAB2Q9HCS7 855 aaKnown RBP18.51■□□□□ 0.55
PTCD3-210ENST00000473829 PDP2Q9P2J9 529 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 PISDQ9UG56 409 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 ASIC3Q9UHC3 531 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 DSPP15924 2871 aaKnown RBP18.51■□□□□ 0.55
PTCD3-210ENST00000473829 URB1O60287 2271 aaKnown RBP18.51■□□□□ 0.55
PTCD3-210ENST00000473829 MN1Q10571 1320 aaPredicted RBP18.5■□□□□ 0.55
PTCD3-210ENST00000473829 GOLGA8KD6RF30 607 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 GOLGA8TH3BQL2 631 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 DNALI1O14645 258 aaPredicted RBP18.5■□□□□ 0.55
PTCD3-210ENST00000473829 CD3EAPO15446 510 aaKnown RBP18.5■□□□□ 0.55
PTCD3-210ENST00000473829 UBXN7O94888 489 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 VAPBO95292 243 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 ITGA2BP08514 1039 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 CCL4P13236 92 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 RBMS1P29558 406 aaKnown RBP18.5■□□□□ 0.55
PTCD3-210ENST00000473829 EIF2S3P41091 472 aaKnown RBP18.5■□□□□ 0.55
PTCD3-210ENST00000473829 ERVPABLB-1P60509 514 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 SNAP47Q5SQN1 464 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 CASC4Q6P4E1 433 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 SYT10Q6XYQ8 523 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 CLEC14AQ86T13 490 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 RBM12BQ8IXT5 1001 aaKnown RBP18.5■□□□□ 0.55
PTCD3-210ENST00000473829 FGF11Q92914 225 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 FCRL3Q96P31 734 aaPredicted RBP18.5■□□□□ 0.55
PTCD3-210ENST00000473829 DCBLD2Q96PD2 775 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 TRIM51Q9BSJ1 452 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 EPB41L1Q9H4G0 881 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 VPS37BQ9H9H4 285 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 IL1RAPL1Q9NZN1 696 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 ADAMTS20P59510 1910 aa18.5■□□□□ 0.55
PTCD3-210ENST00000473829 A8MU76 341 aa18.49■□□□□ 0.55
PTCD3-210ENST00000473829 HGSO14964 777 aaPredicted RBP18.49■□□□□ 0.55
PTCD3-210ENST00000473829 KRT37O76014 449 aa18.49■□□□□ 0.55
PTCD3-210ENST00000473829 JMJD7P0C870 316 aa18.49■□□□□ 0.55
PTCD3-210ENST00000473829 CAPZBP47756 277 aa18.49■□□□□ 0.55
PTCD3-210ENST00000473829 ARCN1P48444 511 aaKnown RBP18.49■□□□□ 0.55
PTCD3-210ENST00000473829 PPP1CAP62136 330 aa18.49■□□□□ 0.55
PTCD3-210ENST00000473829 ETF1P62495 437 aaKnown RBP18.49■□□□□ 0.55
PTCD3-210ENST00000473829 TRA2AQ13595 282 aaKnown RBP eCLIP18.49■□□□□ 0.55
PTCD3-210ENST00000473829 KIAA0930Q6ICG6 404 aaPredicted RBP18.49■□□□□ 0.55
PTCD3-210ENST00000473829 JAMLQ86YT9 394 aa18.49■□□□□ 0.55
PTCD3-210ENST00000473829 TMEM159Q96B96 161 aa18.49■□□□□ 0.55
PTCD3-210ENST00000473829 CMKLR1Q99788 373 aa18.49■□□□□ 0.55
PTCD3-210ENST00000473829 THSD1Q9NS62 852 aa18.49■□□□□ 0.55
PTCD3-210ENST00000473829 KLHL3Q9UH77 587 aa18.49■□□□□ 0.55
PTCD3-210ENST00000473829 A0A087WV48 116 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 SDR42E2A6NKP2 422 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 IQCF5A8MTL0 148 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 QSOX1O00391 747 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 TTI1O43156 1089 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 C9P02748 559 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 FTH1P02794 183 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 OR56A5P0C7T3 313 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 ITGB6P18564 788 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 PAFAH1B1P43034 410 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 LEPRP48357 1165 aaKnown RBP18.48■□□□□ 0.55
PTCD3-210ENST00000473829 DR1Q01658 176 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 BRD3Q15059 726 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 AARS2Q5JTZ9 985 aaKnown RBP18.48■□□□□ 0.55
PTCD3-210ENST00000473829 IZUMO3Q5VZ72 239 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 ARHGAP22Q7Z5H3 698 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 ELMO1Q92556 727 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 PMEPA1Q969W9 287 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 ZNF669Q96BR6 464 aaPredicted RBP18.48■□□□□ 0.55
PTCD3-210ENST00000473829 SIGLEC10Q96LC7 697 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 TTC1Q99614 292 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 NRTNQ99748 197 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 P2RY12Q9H244 342 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 OCIAD1Q9NX40 245 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 SAMD15Q9P1V8 674 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 ANAPC5Q9UJX4 755 aa18.48■□□□□ 0.55
PTCD3-210ENST00000473829 ZCWPW2A0A1B0GU75 182 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 FAM237BA0A1B0GVD1 139 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 SLC5A10A0PJK1 596 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 CCDC188H7C350 402 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 BANF1O75531 89 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 F7P08709 466 aaPredicted RBP18.47■□□□□ 0.55
PTCD3-210ENST00000473829 GSTM1P09488 218 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 FGF3P11487 239 aaPredicted RBP18.47■□□□□ 0.55
PTCD3-210ENST00000473829 AMD1P17707 334 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 ITPKBP27987 946 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 CASQ1P31415 396 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 SLC5A2P31639 672 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 CCR7P32248 378 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 MLLT3P42568 568 aaPredicted RBP18.47■□□□□ 0.55
PTCD3-210ENST00000473829 TTPAP49638 278 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 MAPK10P53779 464 aa18.47■□□□□ 0.55
PTCD3-210ENST00000473829 PCBP4P57723 403 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms