RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 IL17CQ9P0M4 197 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 MAP10Q9P2G4 905 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 SAE1Q9UBE0 346 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-223ENST00000473345 FAM8A1Q9UBU6 413 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 SLC24A2Q9UI40 661 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 SNX7Q9UNH6 387 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 SRPK3Q9UPE1 567 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 ABCA12Q86UK0 2595 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 OTOGQ6ZRI0 2925 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 FER1L5A0AVI2 2057 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 LOC285095A0A1B0GVY8 99 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 SSU72P8A0A1W2PR75 194 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 DPM1O60762 260 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 PROSCO94903 275 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 ZBTB11O95625 1053 aaPredicted RBP9.35□□□□□ -0.91
MCF2L-223ENST00000473345 NDST3O95803 873 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 CBSLP0DN79 551 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 KDELR1P24390 212 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 PTPN3P26045 913 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 CBSP35520 551 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 GABRA4P48169 554 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 LMAN1P49257 510 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 ADCY2Q08462 1091 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 WASHC5Q12768 1159 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 NR1I3Q14994 352 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 ZIC1Q15915 447 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 SIRPB2Q5JXA9 342 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 ZFYVE27Q5T4F4 411 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 SLC9A4Q6AI14 798 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 MRGPREQ86SM8 312 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 NT5DC3Q86UY8 548 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 AMZ2Q86W34 360 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 KMT5CQ86Y97 462 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 RBM12BQ8IXT5 1001 aaKnown RBP9.35□□□□□ -0.91
MCF2L-223ENST00000473345 SYTL1Q8IYJ3 562 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 AMER2Q8N7J2 671 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 KCTD6Q8NC69 237 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 RNF214Q8ND24 703 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 DDHD1Q8NEL9 900 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 TRIM11Q96F44 468 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 MRGPRX2Q96LB1 330 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 ADGRE3Q9BY15 652 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 UNKQ9C0B0 810 aaKnown RBP9.35□□□□□ -0.91
MCF2L-223ENST00000473345 SLC25A51Q9H1U9 297 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 GLOD4Q9HC38 313 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 FAM60AQ9NP50 221 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 LATS2Q9NRM7 1088 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 SLC22A11Q9NSA0 550 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 GPR83Q9NYM4 423 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 POMT2Q9UKY4 750 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 HEY1Q9Y5J3 304 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 SPTBP11277 2137 aa9.35□□□□□ -0.91
MCF2L-223ENST00000473345 PDZD2O15018 2839 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 ANKRD17O75179 2603 aaKnown RBP9.34□□□□□ -0.91
MCF2L-223ENST00000473345 UBA6A0AVT1 1052 aaPredicted RBP9.34□□□□□ -0.91
MCF2L-223ENST00000473345 ANKUB1A6NFN9 424 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 SMTNL1A8MU46 457 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 TMEM150CB9EJG8 249 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 MYO1FO00160 1098 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 BTN3A1O00481 513 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 KRT38O76015 456 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 UMODP07911 640 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 PECAM1P16284 738 aaPredicted RBP9.34□□□□□ -0.91
MCF2L-223ENST00000473345 ITGAXP20702 1163 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 CA4P22748 312 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 GRNP28799 593 aaKnown RBP9.34□□□□□ -0.91
MCF2L-223ENST00000473345 OTX2P32243 289 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 HMGCLP35914 325 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 WNT3AP56704 352 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 AP1B1Q10567 949 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 NCF4Q15080 339 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 PLCL1Q15111 1095 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 PDK2Q15119 407 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 LLGL1Q15334 1064 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 DEFB110Q30KQ9 67 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 FNBP1LQ5T0N5 605 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 CDHR3Q6ZTQ4 885 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 SLC25A41Q8N5S1 370 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 OR4E2Q8NGC2 313 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 GDAP1Q8TB36 358 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 C12orf66Q96MD2 445 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 CD180Q99467 661 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 KIR3DX1Q9H7L2 352 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 SLC5A6Q9Y289 635 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 PCDHGB7Q9Y5F8 929 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 PCDHGA10Q9Y5H3 936 aa9.34□□□□□ -0.91
MCF2L-223ENST00000473345 CENPEQ02224 2701 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 CSMD2Q7Z408 3487 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 CCDC78A2IDD5 438 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 ZNF749O43361 778 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 POLBP06746 335 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 PRSS56P0CW18 603 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 TPBGLP0DKB5 382 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 NFKB1P19838 968 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 MX2P20592 715 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 HALP42357 657 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 MSLNQ13421 630 aaPredicted RBP9.33□□□□□ -0.92
MCF2L-223ENST00000473345 SLC9A5Q14940 896 aa9.33□□□□□ -0.92
MCF2L-223ENST00000473345 PRKD1Q15139 912 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms