RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 OR5K3A6NET4 321 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 GOLGA6L3A6NEY3 463 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 AGAP14A8MT82 685 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 ZNF189O75820 626 aaPredicted RBP22.01■■□□□ 1.11
C9orf3-213ENST00000471978 PTMAP06454 111 aaKnown RBP22.01■■□□□ 1.11
C9orf3-213ENST00000471978 SLC35G4P0C7Q5 338 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 CCNYL3P0C7X3 344 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 RALBP11234 206 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 FOLR1P15328 257 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 ARL4DP49703 201 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 CSRP3P50461 194 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 ZNF140P52738 457 aaPredicted RBP22.01■■□□□ 1.11
C9orf3-213ENST00000471978 TUBB3Q13509 450 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 KCNAB1Q14722 419 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 DNTTIP2Q5QJE6 756 aaKnown RBP22.01■■□□□ 1.11
C9orf3-213ENST00000471978 PTRH1Q86Y79 214 aaKnown RBP22.01■■□□□ 1.11
C9orf3-213ENST00000471978 CFAP206Q8IYR0 622 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 SPDYE1Q8NFV5 336 aaPredicted RBP22.01■■□□□ 1.11
C9orf3-213ENST00000471978 APOBEC4Q8WW27 367 aaKnown RBP22.01■■□□□ 1.11
C9orf3-213ENST00000471978 ZFPM2Q8WW38 1151 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 LINC00615Q96LM1 132 aaPredicted RBP22.01■■□□□ 1.11
C9orf3-213ENST00000471978 MAP3K3Q99759 626 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 FAM96AQ9H5X1 160 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 RARRES3Q9UL19 164 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 PCDHB3Q9Y5E6 796 aa22.01■■□□□ 1.11
C9orf3-213ENST00000471978 UBA6A0AVT1 1052 aaPredicted RBP22■■□□□ 1.11
C9orf3-213ENST00000471978 SGTAO43765 313 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 KATNA1O75449 491 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 MT-ND3P03897 115 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 POLBP06746 335 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 ITGALP20701 1170 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 HADHAP40939 763 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 GSE1Q14687 1217 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 SNX20Q7Z614 316 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 KIAA1328Q86T90 577 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 OOSP2Q86WS3 158 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 NXPE1Q8N323 547 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 CD180Q99467 661 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 COPS8Q99627 209 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 ARNT2Q9HBZ2 717 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 FEZ2Q9UHY8 353 aaPredicted RBP22■■□□□ 1.11
C9orf3-213ENST00000471978 SLC24A2Q9UI40 661 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 AMFRQ9UKV5 643 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 PADI1Q9ULC6 663 aa22■■□□□ 1.11
C9orf3-213ENST00000471978 GOLGA6L9A6NEM1 432 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 TLCD2A6NGC4 264 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 CFAP99D6REC4 459 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 CCL22O00626 93 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 LDB2O43679 373 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 TIAF1O95411 115 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 EBLN1P0CF75 366 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 ACY1Q03154 408 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 ARMC6Q6NXE6 501 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 CERS6Q6ZMG9 384 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 ARHGEF18Q6ZSZ5 1173 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 PEX26Q7Z412 305 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 KMT5CQ86Y97 462 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 LILRA3Q8N6C8 439 aaPredicted RBP21.99■■□□□ 1.11
C9orf3-213ENST00000471978 C9orf43Q8TAL5 461 aaPredicted RBP21.99■■□□□ 1.11
C9orf3-213ENST00000471978 HEXDCQ8WVB3 486 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 RMDN2Q96LZ7 410 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 C19orf43Q9BQ61 176 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 KIR3DX1Q9H7L2 352 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 KCND3Q9UK17 655 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 COLEC10Q9Y6Z7 277 aa21.99■■□□□ 1.11
C9orf3-213ENST00000471978 OR6C74A6NCV1 312 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 ATP1B2P14415 290 aaPredicted RBP21.98■■□□□ 1.11
C9orf3-213ENST00000471978 MC4RP32245 332 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 PRLHRP49683 370 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 HSD11B2P80365 405 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 ERV3-1Q14264 604 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 KRT33BQ14525 404 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 PARP6Q2NL67 630 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 CAPRIN2Q6IMN6 1127 aaKnown RBP21.98■■□□□ 1.11
C9orf3-213ENST00000471978 PWWP2BQ6NUJ5 590 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 BPHLQ86WA6 291 aaPredicted RBP21.98■■□□□ 1.11
C9orf3-213ENST00000471978 KLHDC8BQ8IXV7 354 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 UBL4BQ8N7F7 174 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 FAM71DQ8N9W8 422 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 TTC13Q8NBP0 860 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 HM13Q8TCT9 377 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 FCRL4Q96PJ5 515 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 BAG1Q99933 345 aaPredicted RBP21.98■■□□□ 1.11
C9orf3-213ENST00000471978 CCM2Q9BSQ5 444 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 ZNF71Q9NQZ8 489 aaPredicted RBP21.98■■□□□ 1.11
C9orf3-213ENST00000471978 FGF21Q9NSA1 209 aa21.98■■□□□ 1.11
C9orf3-213ENST00000471978 PACSIN2Q9UNF0 486 aaPredicted RBP21.98■■□□□ 1.11
C9orf3-213ENST00000471978 SEPT6Q14141 434 aa21.97■■□□□ 1.11
C9orf3-213ENST00000471978 GPR33Q49SQ1 333 aa21.97■■□□□ 1.11
C9orf3-213ENST00000471978 KCTD11Q693B1 232 aa21.97■■□□□ 1.11
C9orf3-213ENST00000471978 SYCE1Q8N0S2 351 aa21.97■■□□□ 1.11
C9orf3-213ENST00000471978 D2HGDHQ8N465 521 aa21.97■■□□□ 1.11
C9orf3-213ENST00000471978 ABHD17AQ96GS6 310 aa21.97■■□□□ 1.11
C9orf3-213ENST00000471978 DNAJC1Q96KC8 554 aaKnown RBP21.97■■□□□ 1.11
C9orf3-213ENST00000471978 LHX9Q9NQ69 397 aa21.97■■□□□ 1.11
C9orf3-213ENST00000471978 PCDHGA6Q9Y5G7 932 aa21.97■■□□□ 1.11
C9orf3-213ENST00000471978 HEBP2Q9Y5Z4 205 aa21.97■■□□□ 1.11
C9orf3-213ENST00000471978 FLNCQ14315 2725 aa21.96■■□□□ 1.11
C9orf3-213ENST00000471978 C17orf113A0A1B0GUU1 675 aa21.96■■□□□ 1.11
C9orf3-213ENST00000471978 METTL18O95568 372 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms