RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 BRAFP15056 766 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 NDUFS1P28331 727 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 CD151P48509 253 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 EPHA4P54764 986 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 EIF3BP55884 814 aaKnown RBP14.8□□□□□ -0.04
SNX13-205ENST00000471744 GPLD1P80108 840 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 INSM1Q01101 510 aaPredicted RBP14.8□□□□□ -0.04
SNX13-205ENST00000471744 SPIDRQ14159 915 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 ZNF658BQ4V348 819 aaPredicted RBP14.8□□□□□ -0.04
SNX13-205ENST00000471744 SYTL3Q4VX76 610 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 HSP90AA5PQ58FG0 334 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 HES3Q5TGS1 186 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 SPRED1Q7Z699 444 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 GALNT7Q86SF2 657 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 ANKMY2Q8IV38 441 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 CNTN4Q8IWV2 1026 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 CHCHD4Q8N4Q1 142 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 GSDMBQ8TAX9 411 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 NAT14Q8WUY8 206 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 ZFPM2Q8WW38 1151 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 ASZ1Q8WWH4 475 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 TMEM159Q96B96 161 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 GRAMD1AQ96CP6 724 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 SLC38A3Q99624 504 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 DPYSL5Q9BPU6 564 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 LRRN3Q9H3W5 708 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 SAYSD1Q9NPB0 183 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 IL1RAPL1Q9NZN1 696 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 SCHIP1Q9P0W5 487 aaPredicted RBP14.8□□□□□ -0.04
SNX13-205ENST00000471744 FAM8A1Q9UBU6 413 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 TRBV23OR9-2A0A075B6M9 112 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 ESYT3A0FGR9 886 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 NTN3O00634 580 aaPredicted RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 RPLP0P05388 317 aaKnown RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 APOA4P06727 396 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 MTHFD1P11586 935 aaKnown RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 SLC19A1P41440 591 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 SLC1A2P43004 574 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 SHC2P98077 582 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 ILF2Q12905 390 aaKnown RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 CLCA4Q14CN2 919 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 RPE65Q16518 533 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 HP1BP3Q5SSJ5 553 aaPredicted RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 ZDHHC24Q6UX98 284 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 RBM44Q6ZP01 1051 aaKnown RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 PALM2Q8IXS6 379 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 C2CD4AQ8NCU7 369 aaPredicted RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 OR10G6Q8NH81 332 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 C12orf66Q96MD2 445 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 BIRC8Q96P09 236 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 DEPDC7Q96QD5 511 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 GFM1Q96RP9 751 aaKnown RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 WDR83Q9BRX9 315 aaKnown RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 WWP1Q9H0M0 922 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 PPANQ9NQ55 473 aaKnown RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 IARS2Q9NSE4 1012 aaKnown RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 KCNK4Q9NYG8 393 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 ZNF624Q9P2J8 865 aaPredicted RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 DMGDHQ9UI17 866 aaKnown RBP14.79□□□□□ -0.04
SNX13-205ENST00000471744 RABGEF1Q9UJ41 708 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 PSMD13Q9UNM6 376 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 CLCA2Q9UQC9 943 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 WDR37Q9Y2I8 494 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 COLEC10Q9Y6Z7 277 aa14.79□□□□□ -0.04
SNX13-205ENST00000471744 SLC5A10A0PJK1 596 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 FAM221BA6H8Z2 402 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 OR52A4PA6NMU1 304 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 TMX2-CTNND1H3BSU7 103 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 HYAL3O43820 417 aaPredicted RBP14.78□□□□□ -0.04
SNX13-205ENST00000471744 SPAG6O75602 509 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 MT-CO3P00414 261 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 ERVK-10P10266 1014 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 PKMP14618 531 aaKnown RBP14.78□□□□□ -0.04
SNX13-205ENST00000471744 JUPP14923 745 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 ALDH4A1P30038 563 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 FMO4P31512 558 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 LEPRP48357 1165 aaKnown RBP14.78□□□□□ -0.04
SNX13-205ENST00000471744 CCL7P80098 99 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 MGAT5Q09328 741 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 CTBP1Q13363 440 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 SQSTM1Q13501 440 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 CUL1Q13616 776 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 BOP1Q14137 746 aaKnown RBP14.78□□□□□ -0.04
SNX13-205ENST00000471744 FASTKD3Q14CZ7 662 aaKnown RBP14.78□□□□□ -0.04
SNX13-205ENST00000471744 CDCP2Q5VXM1 449 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 CAPRIN2Q6IMN6 1127 aaKnown RBP14.78□□□□□ -0.04
SNX13-205ENST00000471744 TMEM26Q6ZUK4 368 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 CYS1Q717R9 158 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 OTOAQ7RTW8 1153 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 PDZD3Q86UT5 571 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 CCDC25Q86WR0 208 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 DENND6AQ8IWF6 608 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 Q8N9G6 341 aaPredicted RBP14.78□□□□□ -0.04
SNX13-205ENST00000471744 AHCYL2Q96HN2 611 aaKnown RBP14.78□□□□□ -0.04
SNX13-205ENST00000471744 RMDN2Q96LZ7 410 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 OR52A5Q9H2C5 316 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 SYNDIG1Q9H7V2 258 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 SLC40A1Q9NP59 571 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 ZDHHC18Q9NUE0 388 aa14.78□□□□□ -0.04
SNX13-205ENST00000471744 IMP3Q9NV31 184 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms