RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 BNIP3Q12983 259 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TREML2Q5T2D2 321 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 DUS1LQ6P1R4 473 aaKnown RBP13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 OLFML1Q6UWY5 402 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CCDC120Q96HB5 630 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 C12orf66Q96MD2 445 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TOR3AQ9H497 397 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 LRTM1Q9HBL6 345 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CUEDC1Q9NWM3 386 aaPredicted RBP13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 VWA7Q9Y334 891 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 A0A0J9YYE9 177 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 IDO1P14902 403 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 METTL8Q9H825 291 aaKnown RBP13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CARNS1A5YM72 827 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TAS2R50P59544 299 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PRR5P85299 388 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MTFR2Q6P444 385 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TMEM220Q6QAJ8 160 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZNF567Q8N184 647 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RASGEF1CQ8N431 466 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 COMMD4Q9H0A8 199 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TBC1D14Q9P2M4 693 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 WASF2Q9Y6W5 498 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 C9J4A7 227 aa13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TM7SF2O76062 418 aa13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 DCKP27707 260 aa13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZNF135P52742 658 aaPredicted RBP13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 C5orf22Q49AR2 442 aa13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ECHDC2Q86YB7 292 aa13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TRMT10AQ8TBZ6 339 aaKnown RBP13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GORASP1Q9BQQ3 440 aa13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 FUT8Q9BYC5 575 aa13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 NOL11Q9H8H0 719 aaKnown RBP13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TRAF6Q9Y4K3 522 aa13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ABCA8O94911 1581 aa13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CD163L1Q9NR16 1453 aa13.08□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SLURP2P0DP57 97 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 UQCRC1P31930 480 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OGFRL1Q5TC84 451 aaPredicted RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CLEC6AQ6EIG7 209 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CYP2S1Q96SQ9 504 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GDAP2Q9NXN4 497 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ETAA1Q9NY74 926 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZFP37Q9Y6Q3 630 aaPredicted RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZSCAN5BA6NJL1 495 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 LYPLA1O75608 230 aaPredicted RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PRKCGP05129 697 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ETS2P15036 469 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CD247P20963 164 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MLLT3P42568 568 aaPredicted RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RGS19P49795 217 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MRPS5P82675 430 aaKnown RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SIM2Q14190 667 aaPredicted RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 B3GNT6Q6ZMB0 384 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 FAM13CQ8NE31 585 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SRFBP1Q8NEF9 429 aaKnown RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 C16orf58Q96GQ5 468 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 FCF1Q9Y324 198 aaKnown RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SCN2AQ99250 2005 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GRIN2DO15399 1336 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PRAMEF1O95521 474 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 HSD11B1P28845 292 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CYP2C18P33260 490 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CLCNKBP51801 687 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ODF4Q2M2E3 257 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 C9orf57Q5W0N0 161 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 AAGABQ6PD74 315 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GK5Q6ZS86 529 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TMEM156Q8N614 296 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 UBXN10Q96LJ8 280 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KCNK4Q9NYG8 393 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NR2E1Q9Y466 385 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 C5orf51A6NDU8 294 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ANXA2P2A6NMY6 339 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PCDHGA12O60330 932 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ANXA2P07355 339 aaKnown RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MATKP42679 507 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ARFRP1Q13795 201 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KATNAL2Q8IYT4 538 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KBTBD8Q8NFY9 601 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CIDECQ96AQ7 238 aaPredicted RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF570Q96NI8 536 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 POLR3BQ9NW08 1133 aaPredicted RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 HHLA1C9JL84 531 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MID1O15344 667 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NOL4O94818 638 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 UBXN7O94888 489 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 FGF1P05230 155 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 DRD4P21917 467 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NR0B1P51843 470 aaKnown RBP13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CATSPERGQ6ZRH7 1159 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR5B17Q8NGF7 314 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GRHL3Q8TE85 626 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KLHL15Q96M94 604 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF224Q9NZL3 707 aa13.08□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PLD2O14939 933 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms