RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 INTS10Q9NVR2 710 aaKnown RBP14.96□□□□□ -0.01
SDC3-203ENST00000471567 FAM8A1Q9UBU6 413 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 GNPTGQ9UJJ9 305 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 HEBP2Q9Y5Z4 205 aa14.96□□□□□ -0.01
SDC3-203ENST00000471567 PIKFYVEQ9Y2I7 2098 aa14.96□□□□□ -0.02
SDC3-203ENST00000471567 TRABD2BA6NFA1 517 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 GOLGA8KD6RF30 607 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 E7ESA3 106 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 GOLGA8TH3BQL2 631 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 CASC3O15234 703 aaKnown RBP14.95□□□□□ -0.02
SDC3-203ENST00000471567 DUX1O43812 170 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 MTHFD1P11586 935 aaKnown RBP14.95□□□□□ -0.02
SDC3-203ENST00000471567 NDUFS1P28331 727 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 CCKBRP32239 447 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 ELK3P41970 407 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 CAV1Q03135 178 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 ZFP36L1Q07352 338 aaKnown RBP14.95□□□□□ -0.02
SDC3-203ENST00000471567 CRYMQ14894 314 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 PTRHD1Q6GMV3 140 aaKnown RBP14.95□□□□□ -0.02
SDC3-203ENST00000471567 CENPUQ71F23 418 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 ZNF761Q86XN6 746 aaPredicted RBP14.95□□□□□ -0.02
SDC3-203ENST00000471567 MMGT1Q8N4V1 131 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 ELMO1Q92556 727 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 LPGAT1Q92604 370 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 AHCYL2Q96HN2 611 aaKnown RBP14.95□□□□□ -0.02
SDC3-203ENST00000471567 C12orf66Q96MD2 445 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 PWWP2AQ96N64 755 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 PANX3Q96QZ0 392 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 FAM167BQ9BTA0 163 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 OR52A5Q9H2C5 316 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 DPH5Q9H2P9 285 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 EPB41L5Q9HCM4 733 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 ATXN7L1Q9ULK2 861 aaPredicted RBP14.95□□□□□ -0.02
SDC3-203ENST00000471567 PCDHB1Q9Y5F3 818 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 ENTPD2Q9Y5L3 495 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 TEX264Q9Y6I9 313 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 COLEC10Q9Y6Z7 277 aa14.95□□□□□ -0.02
SDC3-203ENST00000471567 SLC5A10A0PJK1 596 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 H3BMM5 538 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 IFRD1O00458 451 aaPredicted RBP14.94□□□□□ -0.02
SDC3-203ENST00000471567 KPNA5O15131 536 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 BANF1O75531 89 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 S1PR4O95977 384 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 ESR1P03372 595 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 PDX1P52945 283 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 INHBCP55103 352 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 RTP5Q14D33 572 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 MAP9Q49MG5 647 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 ZNF470Q6ECI4 717 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 C8orf74Q6P047 294 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 TMEM71Q6P5X7 295 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 WDR74Q6RFH5 385 aaPredicted RBP14.94□□□□□ -0.02
SDC3-203ENST00000471567 UNQ6494/PRO21346Q6UXR6 183 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 USP53Q70EK8 1073 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 IGDCC3Q8IVU1 814 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 SLITRK4Q8IW52 837 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 SPDYE1Q8NFV5 336 aaPredicted RBP14.94□□□□□ -0.02
SDC3-203ENST00000471567 OR4D9Q8NGE8 314 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 LIN37Q96GY3 246 aaPredicted RBP14.94□□□□□ -0.02
SDC3-203ENST00000471567 RMDN2Q96LZ7 410 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 STRADBQ9C0K7 418 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 IMP3Q9NV31 184 aaKnown RBP14.94□□□□□ -0.02
SDC3-203ENST00000471567 GRHL1Q9NZI5 618 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 IL1RAPL1Q9NZN1 696 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 ZC3H7BQ9UGR2 993 aaKnown RBP14.94□□□□□ -0.02
SDC3-203ENST00000471567 COL27A1Q8IZC6 1860 aaPredicted RBP14.94□□□□□ -0.02
SDC3-203ENST00000471567 CEP295Q9C0D2 2601 aa14.94□□□□□ -0.02
SDC3-203ENST00000471567 UBA6A0AVT1 1052 aaPredicted RBP14.93□□□□□ -0.02
SDC3-203ENST00000471567 CTAGE15A4D2H0 777 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 EIF3HO15372 352 aaKnown RBP eCLIP14.93□□□□□ -0.02
SDC3-203ENST00000471567 APOA4P06727 396 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 CTAGE8P0CG41 777 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 PDHA2P29803 388 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 CCR7P32248 378 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 PREPP48147 710 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 LIMK2P53671 638 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 EIF3BP55884 814 aaKnown RBP14.93□□□□□ -0.02
SDC3-203ENST00000471567 PDIA2Q13087 525 aaKnown RBP14.93□□□□□ -0.02
SDC3-203ENST00000471567 EIF3IQ13347 325 aaKnown RBP14.93□□□□□ -0.02
SDC3-203ENST00000471567 TRA2AQ13595 282 aaKnown RBP eCLIP14.93□□□□□ -0.02
SDC3-203ENST00000471567 GPR18Q14330 331 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 FRG1Q14331 258 aaKnown RBP14.93□□□□□ -0.02
SDC3-203ENST00000471567 SYTL3Q4VX76 610 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 NKAIN2Q5VXU1 208 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 STEAP4Q687X5 459 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 CTAGE6Q86UF2 777 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 PDZD3Q86UT5 571 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 KCNMB4Q86W47 210 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 CTAGE4Q8IX94 777 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 ASZ1Q8WWH4 475 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 ART4Q93070 314 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 TMEM159Q96B96 161 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 NXPE2Q96DL1 559 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 ATXN7L3BQ96GX2 97 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 BIRC8Q96P09 236 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 NUDT22Q9BRQ3 303 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 LRRC1Q9BTT6 524 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 TBC1D10AQ9BXI6 508 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 PHACTR1Q9C0D0 580 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 MVB12BQ9H7P6 319 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms