RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 USP42Q9H9J4 1324 aaKnown RBP5.26□□□□□ -1.57
CCDC39-202ENST00000471307 UBR3Q6ZT12 1888 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 AFDNP55196 1824 aaKnown RBP5.26□□□□□ -1.57
CCDC39-202ENST00000471307 FAM237AA0A1B0GTK4 181 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 ZCWPW2A0A1B0GU75 182 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 HS3ST1O14792 307 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 SYNGR3O43761 229 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 IGHV4-39P01824 125 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 IGHDP01880 384 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 UBA7P41226 1012 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 MAD2L1Q13257 205 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-202ENST00000471307 DCTN2Q13561 401 aaKnown RBP5.26□□□□□ -1.57
CCDC39-202ENST00000471307 SLC15A2Q16348 729 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 CCDC96Q2M329 555 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 SIRPB2Q5JXA9 342 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 PLEKHM3Q6ZWE6 761 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 EPHX4Q8IUS5 362 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 KLHDC9Q8NEP7 349 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 FAM76AQ8TAV0 307 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 APBB2Q92870 758 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 RHBDF1Q96CC6 855 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 ZNF501Q96CX3 271 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-202ENST00000471307 ALG14Q96F25 216 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 PPP1R13BQ96KQ4 1090 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 STRA6Q9BX79 667 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 NYXQ9GZU5 481 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 DCTPP1Q9H773 170 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 ABI3Q9P2A4 366 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 UBA2Q9UBT2 640 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-202ENST00000471307 TRMT112Q9UI30 125 aaKnown RBP5.26□□□□□ -1.57
CCDC39-202ENST00000471307 ARHGAP26Q9UNA1 814 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 FAF1Q9UNN5 650 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-202ENST00000471307 CAMK2AQ9UQM7 478 aa5.26□□□□□ -1.57
CCDC39-202ENST00000471307 NIP7Q9Y221 180 aaKnown RBP eCLIP5.26□□□□□ -1.57
CCDC39-202ENST00000471307 SH3TC1Q8TE82 1336 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 CDHR2Q9BYE9 1310 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 ANKRD36CQ5JPF3 1778 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 IGLV5-45A0A087WSX0 123 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 EIF3CLB5ME19 914 aaKnown RBP5.25□□□□□ -1.57
CCDC39-202ENST00000471307 KCNN4O15554 427 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 SEC14L2O76054 403 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 INHBAP08476 426 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 FGF5P12034 268 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 TM4SF1P30408 202 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 APOBEC1P41238 236 aaKnown RBP5.25□□□□□ -1.57
CCDC39-202ENST00000471307 LINC01547P58512 204 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-202ENST00000471307 PLIN5Q00G26 463 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 SREBF2Q12772 1141 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 CCNG2Q16589 344 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 RABL6Q3YEC7 729 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-202ENST00000471307 CXorf66Q5JRM2 361 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-202ENST00000471307 SLC10A5Q5PT55 438 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 SUSD4Q5VX71 490 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 C18orf63Q68DL7 685 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 SLC35E4Q6ICL7 350 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 CCDC70Q6NSX1 233 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 FAM171BQ6P995 826 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 SMIM5Q71RC9 77 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 DEFB132Q7Z7B7 95 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 IGSF8Q969P0 613 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 FAM149B1Q96BN6 582 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 RRNAD1Q96FB5 475 aaKnown RBP5.25□□□□□ -1.57
CCDC39-202ENST00000471307 C17orf77Q96MU5 243 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 F2RL3Q96RI0 385 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 PCYT2Q99447 389 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 PAIP1Q9H074 479 aaKnown RBP5.25□□□□□ -1.57
CCDC39-202ENST00000471307 SIL1Q9H173 461 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 BICC1Q9H694 974 aaKnown RBP5.25□□□□□ -1.57
CCDC39-202ENST00000471307 ZNF696Q9H7X3 374 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 SWAP70Q9UH65 585 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 PADI3Q9ULW8 664 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 NAALADL1Q9UQQ1 740 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 KLHL20Q9Y2M5 609 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 CAPN7Q9Y6W3 813 aa5.25□□□□□ -1.57
CCDC39-202ENST00000471307 UBN2Q6ZU65 1347 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 BCORQ6W2J9 1755 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 PMS2P5A8MQ11 134 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 SERPINB2P05120 415 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 PYGLP06737 847 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 UGT1A1P22309 533 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 AHRP35869 848 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 ATP12AP54707 1039 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 PMP22Q01453 160 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 TMEM30BQ3MIR4 351 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 ALFQ53S48 1182 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 OR7E24Q6IFN5 339 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 SLC27A1Q6PCB7 646 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 NBPF5PQ86XG9 351 aaPredicted RBP5.24□□□□□ -1.57
CCDC39-202ENST00000471307 CCDC13Q8IYE1 715 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 SRBD1Q8N5C6 995 aaKnown RBP5.24□□□□□ -1.57
CCDC39-202ENST00000471307 ACVR1CQ8NER5 493 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 ST6GAL2Q96JF0 529 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 MAP7D2Q96T17 732 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 AGXT2Q9BYV1 514 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 DLGAP2Q9P1A6 1054 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 GTF2A1LQ9UNN4 478 aa5.24□□□□□ -1.57
CCDC39-202ENST00000471307 M0QZ24 198 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 SNAP23O00161 211 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 PAGE4O60829 102 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 ZG16O60844 167 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms