RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 ADAMTSL4Q6UY14 1074 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 FAM83HQ6ZRV2 1179 aaPredicted RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 FRMD7Q6ZUT3 714 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 USP30Q70CQ3 517 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TRMT11Q7Z4G4 463 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 HORMAD1Q86X24 394 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 GPSM1Q86YR5 675 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 WDR75Q8IWA0 830 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TBC1D3Q8IZP1 549 aaPredicted RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 ANKS4BQ8N8V4 417 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 ASB11Q8WXH4 323 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 CCT6BQ92526 530 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 ELMO1Q92556 727 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 HIC2Q96JB3 615 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 PANX3Q96QZ0 392 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 MYOCQ99972 504 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TMEM120AQ9BXJ8 343 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TEX101Q9BY14 249 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 SLC17A9Q9BYT1 436 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TRIM55Q9BYV6 548 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 KLHL42Q9P2K6 505 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 MID2Q9UJV3 735 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 FZD4Q9ULV1 537 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 SORCS3Q9UPU3 1222 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 ST14Q9Y5Y6 855 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TDRD6O60522 2096 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 PCM1Q15154 2024 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 POM121BA6NF01 834 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 CFAP99D6REC4 459 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 ANKRD65E5RJM6 399 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 H0Y8X5 98 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 EBAG9O00559 213 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 CHUKO15111 745 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 SLC31A1O15431 190 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 FFAR2O15552 330 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 NPHS1O60500 1241 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 SUPT7LO94864 414 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 HSPA4LO95757 839 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 GUCA1CO95843 209 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 RPS17P08708 135 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TPBGLP0DKB5 382 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 EEF1DP29692 281 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 GDF5P43026 501 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 FOXA1P55317 472 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 STARD6P59095 220 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 RPS21P63220 83 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 ZBTB16Q05516 673 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 E2F5Q15329 346 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 CCSMST1Q4G0I0 132 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 BCL7AQ4VC05 210 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 DOK6Q6PKX4 331 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 CRTC3Q6UUV7 619 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 ALYREFQ86V81 257 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 CRLF3Q8IUI8 442 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 SIX5Q8N196 739 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 MSANTD3Q96H12 275 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 TMEM79Q9BSE2 394 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 LTB4R2Q9NPC1 389 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 ITM2CQ9NQX7 267 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 USP36Q9P275 1121 aaKnown RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 PNMA8BQ9ULN7 279 aaPredicted RBP8.17□□□□□ -1.1
GTF3A-206ENST00000470606 PDE10AQ9Y233 779 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 SLCO1B1Q9Y6L6 691 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 USH1CQ9Y6N9 552 aa8.17□□□□□ -1.1
GTF3A-206ENST00000470606 CCT8L1PA6NM43 557 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 FAM170BA6NMN3 283 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 CHURC1-FNTBB4DL54 471 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 GFYI3L273 518 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 MATN2O00339 956 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 E2F3O00716 465 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 MAN2B1O00754 1011 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 ATG13O75143 517 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 MATN4O95460 622 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 GFAPP14136 432 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 CD1EP15812 388 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 PBLDP30039 288 aaPredicted RBP8.16□□□□□ -1.1
GTF3A-206ENST00000470606 RGS4P49798 205 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 IDH3AP50213 366 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 ALDH18A1P54886 795 aaKnown RBP8.16□□□□□ -1.1
GTF3A-206ENST00000470606 CLDN2P57739 230 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 NFE2L1Q14494 772 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 UBXN2BQ14CS0 331 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 SETDB1Q15047 1291 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 PLA2G4EQ3MJ16 856 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 UGT3A2Q3SY77 523 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 TTC31Q49AM3 519 aaPredicted RBP8.16□□□□□ -1.1
GTF3A-206ENST00000470606 SLC9B1Q4ZJI4 515 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 PLEKHS1Q5SXH7 462 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 ANO7Q6IWH7 933 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 KIAA1161Q6NSJ0 714 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 SYT13Q7L8C5 426 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 TRPM8Q7Z2W7 1104 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 SLC22A9Q8IVM8 553 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 MYO1HQ8N1T3 1032 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 FBXO39Q8N4B4 442 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 FAM160A2Q8N612 972 aaPredicted RBP8.16□□□□□ -1.1
GTF3A-206ENST00000470606 SPDYE1Q8NFV5 336 aaPredicted RBP8.16□□□□□ -1.1
GTF3A-206ENST00000470606 RLN3Q8WXF3 142 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 CCDC126Q96EE4 140 aa8.16□□□□□ -1.1
GTF3A-206ENST00000470606 CNDP1Q96KN2 507 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms