RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
COL7A1-208ENST00000470076 HSD11B2P80365 405 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 OTUD4Q01804 1114 aaKnown RBP17.07■□□□□ 0.32
COL7A1-208ENST00000470076 KCNAB1Q14722 419 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 ANKRD20A2Q5SQ80 823 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 ANKRD20A1Q5TYW2 823 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 ANKRD20A3Q5VUR7 823 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 PWWP2BQ6NUJ5 590 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 D2HGDHQ8N465 521 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 CT55Q8WUE5 264 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 SEC14L1Q92503 715 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 PPP1R2P1Q96PQ5 205 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 C19orf43Q9BQ61 176 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 TWSG1Q9GZX9 223 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 KIR3DX1Q9H7L2 352 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 C10orf88Q9H8K7 445 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 SLC24A2Q9UI40 661 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 FKBPLQ9UIM3 349 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 PCDHA3Q9Y5H8 950 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 MACROD2A1Z1Q3 448 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 PIPSLA2A3N6 862 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 CDC14CA4D256 554 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 AGAP14A8MT82 685 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 PJA2O43164 708 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 FURINP09958 794 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 EBLN1P0CF75 366 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 RBP3P10745 1247 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 CTNNA2P26232 953 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 PSMB4P28070 264 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 PTPN7P35236 360 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 FOXK1P85037 733 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 XIAPP98170 497 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 KLRB1Q12918 225 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 TCTN3Q6NUS6 607 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 ARMC6Q6NXE6 501 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 OR8K5Q8NH50 307 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 ULK4Q96C45 1275 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 DCUN1D1Q96GG9 259 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 APOL2Q9BQE5 337 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 GPR87Q9BY21 358 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 OSBPL8Q9BZF1 889 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 CRLS1Q9UJA2 301 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 TP53TG5Q9Y2B4 290 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 COLEC10Q9Y6Z7 277 aa17.06■□□□□ 0.32
COL7A1-208ENST00000470076 CCDC66A2RUB6 948 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 KCNN4O15554 427 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 SGTAO43765 313 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 RFPL1O75677 317 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 ZNF189O75820 626 aaPredicted RBP17.05■□□□□ 0.32
COL7A1-208ENST00000470076 ZBTB11O95625 1053 aaPredicted RBP17.05■□□□□ 0.32
COL7A1-208ENST00000470076 NDUFS1P28331 727 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 HADHAP40939 763 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 CETN2P41208 172 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 PMS2P54278 862 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 EIF3EP60228 445 aaKnown RBP17.05■□□□□ 0.32
COL7A1-208ENST00000470076 TUBB4BP68371 445 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 TUBB2AQ13885 445 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 GSE1Q14687 1217 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 TMTC4Q5T4D3 741 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 CAPRIN2Q6IMN6 1127 aaKnown RBP17.05■□□□□ 0.32
COL7A1-208ENST00000470076 DUS1LQ6P1R4 473 aaKnown RBP17.05■□□□□ 0.32
COL7A1-208ENST00000470076 SPDYE1Q8NFV5 336 aaPredicted RBP17.05■□□□□ 0.32
COL7A1-208ENST00000470076 HM13Q8TCT9 377 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 HEXDCQ8WVB3 486 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 LRRC45Q96CN5 670 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 SPATA13Q96N96 652 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 CCM2Q9BSQ5 444 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 TUBB2BQ9BVA1 445 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 ACTL8Q9H568 366 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 FAM8A1Q9UBU6 413 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 FEZ2Q9UHY8 353 aaPredicted RBP17.05■□□□□ 0.32
COL7A1-208ENST00000470076 HEBP2Q9Y5Z4 205 aa17.05■□□□□ 0.32
COL7A1-208ENST00000470076 OR6C74A6NCV1 312 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 CFAP99D6REC4 459 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 CPNE3O75131 537 aaKnown RBP17.04■□□□□ 0.32
COL7A1-208ENST00000470076 NTRK1P04629 796 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 ITGALP20701 1170 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 PRLHRP49683 370 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 RWDD2BP57060 319 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 MSLNQ13421 630 aaPredicted RBP17.04■□□□□ 0.32
COL7A1-208ENST00000470076 OLIG2Q13516 323 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 KRT33BQ14525 404 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 COLEC12Q5KU26 742 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 DARS2Q6PI48 645 aaKnown RBP17.04■□□□□ 0.32
COL7A1-208ENST00000470076 CERS6Q6ZMG9 384 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 SNX20Q7Z614 316 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 APLFQ8IW19 511 aaPredicted RBP17.04■□□□□ 0.32
COL7A1-208ENST00000470076 CFAP206Q8IYR0 622 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 NXPE1Q8N323 547 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 OR13C4Q8NGS5 318 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 NAT14Q8WUY8 206 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 RMDN2Q96LZ7 410 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 COPS8Q99627 209 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 ARNT2Q9HBZ2 717 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 KCND1Q9NSA2 647 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 BTRCQ9Y297 605 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 MAN2B2Q9Y2E5 1009 aa17.04■□□□□ 0.32
COL7A1-208ENST00000470076 EPN1Q9Y6I3 576 aaPredicted RBP17.04■□□□□ 0.32
COL7A1-208ENST00000470076 RELNP78509 3460 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 RP1L1Q8IWN7 2480 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms