RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SGTAO43765 313 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 RBP3P10745 1247 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 CTNNA2P26232 953 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 PSMB4P28070 264 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 CYLC1P35663 651 aaPredicted RBP12.96□□□□□ -0.33
CPSF4-210ENST00000469897 ARCN1P48444 511 aaKnown RBP12.96□□□□□ -0.33
CPSF4-210ENST00000469897 COPS2P61201 443 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 HSD11B2P80365 405 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 MSLNQ13421 630 aaPredicted RBP12.96□□□□□ -0.33
CPSF4-210ENST00000469897 DNASE1L3Q13609 305 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 KRT33BQ14525 404 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 LACTB2Q53H82 288 aaPredicted RBP12.96□□□□□ -0.33
CPSF4-210ENST00000469897 ARMC6Q6NXE6 501 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 CYB5D1Q6P9G0 228 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 BPHLQ86WA6 291 aaPredicted RBP12.96□□□□□ -0.33
CPSF4-210ENST00000469897 OR4E2Q8NGC2 313 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 OR13C4Q8NGS5 318 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 CCDC110Q8TBZ0 833 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 ZFPM2Q8WW38 1151 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 DCUN1D1Q96GG9 259 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 PPM1MQ96MI6 270 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 FCRL4Q96PJ5 515 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 FERMT1Q9BQL6 677 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 OSBPL8Q9BZF1 889 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 SLC24A2Q9UI40 661 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 TLK1Q9UKI8 766 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 POLHQ9Y253 713 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 PCDHGA6Q9Y5G7 932 aa12.96□□□□□ -0.33
CPSF4-210ENST00000469897 EPN1Q9Y6I3 576 aaPredicted RBP12.96□□□□□ -0.33
CPSF4-210ENST00000469897 MACROD2A1Z1Q3 448 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 CCDC66A2RUB6 948 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 AGAP14A8MT82 685 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 MKRN2OSH3BPM6 223 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 CCL22O00626 93 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 CRTAMO95727 393 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 PYGMP11217 842 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 POLR2CP19387 275 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-210ENST00000469897 CTNNA1P35221 906 aaKnown RBP12.95□□□□□ -0.34
CPSF4-210ENST00000469897 FOXK1P85037 733 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 GPR19Q15760 415 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 CAPRIN2Q6IMN6 1127 aaKnown RBP12.95□□□□□ -0.34
CPSF4-210ENST00000469897 DENND5AQ6IQ26 1287 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 SARM1Q6SZW1 724 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 MICALCLQ6ZW33 695 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 OOSP2Q86WS3 158 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 KMT5CQ86Y97 462 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 CDKL3Q8IVW4 592 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-210ENST00000469897 D2HGDHQ8N465 521 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 PHC3Q8NDX5 983 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 LINC00615Q96LM1 132 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-210ENST00000469897 KIR3DX1Q9H7L2 352 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 LUC7LQ9NQ29 371 aaKnown RBP12.95□□□□□ -0.34
CPSF4-210ENST00000469897 KCND1Q9NSA2 647 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 CRLS1Q9UJA2 301 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 TP53TG5Q9Y2B4 290 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 EFR3BQ9Y2G0 817 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 COLEC10Q9Y6Z7 277 aa12.95□□□□□ -0.34
CPSF4-210ENST00000469897 COL6A6A6NMZ7 2263 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 TLCD2A6NGC4 264 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 SOWAHDA6NJG2 315 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 SLC9B1P1A6NJY1 282 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 C21orf140B9A014 251 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 STK10O94804 968 aaKnown RBP12.94□□□□□ -0.34
CPSF4-210ENST00000469897 ZBTB11O95625 1053 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-210ENST00000469897 RECKO95980 971 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 SLC35G4P0C7Q5 338 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 RALBP11234 206 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 ATP1B2P14415 290 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-210ENST00000469897 TPH1P17752 444 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 CDKN1CP49918 316 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-210ENST00000469897 KPNA2P52292 529 aaKnown RBP12.94□□□□□ -0.34
CPSF4-210ENST00000469897 RWDD2BP57060 319 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 RPS18P62269 152 aaKnown RBP12.94□□□□□ -0.34
CPSF4-210ENST00000469897 TUBB4BP68371 445 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 KLRB1Q12918 225 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 TUBB2AQ13885 445 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 BCL7AQ4VC05 210 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 TMTC4Q5T4D3 741 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 PRAMEF17Q5VTA0 474 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 ASB18Q6ZVZ8 466 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 TEX19Q8NA77 164 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 SLC38A9Q8NBW4 561 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 ZNF501Q96CX3 271 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-210ENST00000469897 RMDN2Q96LZ7 410 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 FERD3LQ96RJ6 166 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 CD180Q99467 661 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 COPS8Q99627 209 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 NRTNQ99748 197 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 CCM2Q9BSQ5 444 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 TUBB2BQ9BVA1 445 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 ACTL8Q9H568 366 aa12.94□□□□□ -0.34
CPSF4-210ENST00000469897 FARSAQ9Y285 508 aaKnown RBP12.94□□□□□ -0.34
CPSF4-210ENST00000469897 KLHL33A6NCF5 533 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 PJA2O43164 708 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 LDB2O43679 373 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 SCRG1O75711 98 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 DNAJB5O75953 348 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 TJP3O95049 919 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 PRSS56P0CW18 603 aa12.93□□□□□ -0.34
CPSF4-210ENST00000469897 PTPN4P29074 926 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms