RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 HHEXQ03014 270 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 INSCQ1MX18 579 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 AMZ1Q400G9 498 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 DENND5AQ6IQ26 1287 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 HIBCHQ6NVY1 386 aaPredicted RBP14.23□□□□□ -0.13
COL27A1-203ENST00000468565 TMPRSS9Q7Z410 1059 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 SLC9B2Q86UD5 537 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 RELL1Q8IUW5 271 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 GDAP1Q8TB36 358 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 CCDC77Q9BR77 488 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 LRRC40Q9H9A6 602 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 KCNK4Q9NYG8 393 aa14.23□□□□□ -0.13
COL27A1-203ENST00000468565 PMS2P1A4D2B8 440 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 DNALI1O14645 258 aaPredicted RBP14.22□□□□□ -0.13
COL27A1-203ENST00000468565 SNX2O60749 519 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 KIAA0754O94854 1291 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 METTL18O95568 372 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 UGT1A5P35504 534 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 OASLQ15646 514 aaKnown RBP14.22□□□□□ -0.13
COL27A1-203ENST00000468565 TNFAIP8L3Q5GJ75 292 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 UBAP2Q5T6F2 1119 aaKnown RBP14.22□□□□□ -0.13
COL27A1-203ENST00000468565 C11orf96Q7Z7L8 435 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 OR4K2Q8NGD2 314 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 TTC25Q96NG3 672 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 SLC38A3Q99624 504 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 NUDT22Q9BRQ3 303 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 SEMA6CQ9H3T2 930 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 RDH14Q9HBH5 336 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 NINJ2Q9NZG7 142 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 SLC23A2Q9UGH3 650 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 LOXL2Q9Y4K0 774 aa14.22□□□□□ -0.13
COL27A1-203ENST00000468565 TRBV23OR9-2A0A075B6M9 112 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 UGT1A9O60656 530 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 PRAMEF1O95521 474 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 VCLP18206 1134 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 UGT1A6P19224 532 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 UGT1A1P22309 533 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 UGT1A4P22310 534 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 ITPKBP27987 946 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 UGT1A3P35503 534 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 EPHA4P54764 986 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 TRA2AQ13595 282 aaKnown RBP eCLIP14.21□□□□□ -0.13
COL27A1-203ENST00000468565 SPARCL1Q14515 664 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 PTPRCAPQ14761 206 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 PLA2G4EQ3MJ16 856 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 GPRC6AQ5T6X5 926 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 WASH2PQ6VEQ5 465 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 USP53Q70EK8 1073 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 TRAPPC5Q8IUR0 188 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 OR4D9Q8NGE8 314 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 ZNF398Q8TD17 642 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 CCDC97Q96F63 343 aaPredicted RBP14.21□□□□□ -0.13
COL27A1-203ENST00000468565 CMKLR1Q99788 373 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.21□□□□□ -0.13
COL27A1-203ENST00000468565 OSGEPL1Q9H4B0 414 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 UGT1A7Q9HAW7 530 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 UGT1A10Q9HAW8 530 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 UGT1A8Q9HAW9 530 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 WASH6PQ9NQA3 447 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 PRDM8Q9NQV8 689 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 PCDHGA7Q9Y5G6 932 aa14.21□□□□□ -0.13
COL27A1-203ENST00000468565 DNMT3AQ9Y6K1 912 aaPredicted RBP14.21□□□□□ -0.13
COL27A1-203ENST00000468565 IGHV5-10-1A0A0J9YXX1 117 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 HGSO14964 777 aaPredicted RBP14.21□□□□□ -0.14
COL27A1-203ENST00000468565 SRP72O76094 671 aaKnown RBP14.21□□□□□ -0.14
COL27A1-203ENST00000468565 AP2A1O95782 977 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 CHN1P15882 459 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 XRCC1P18887 633 aaPredicted RBP14.21□□□□□ -0.14
COL27A1-203ENST00000468565 HADHAP40939 763 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 ZNF140P52738 457 aaPredicted RBP14.21□□□□□ -0.14
COL27A1-203ENST00000468565 LIMK2P53671 638 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 UBE2IP63279 158 aaKnown RBP14.21□□□□□ -0.14
COL27A1-203ENST00000468565 DMPKQ09013 629 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 KYNUQ16719 465 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 LONRF1Q17RB8 773 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 PHF19Q5T6S3 580 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 AGAP9Q5VTM2 703 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 ABRAXAS1Q6UWZ7 409 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 ZNF574Q6ZN55 896 aaPredicted RBP14.21□□□□□ -0.14
COL27A1-203ENST00000468565 SPACA3Q8IXA5 215 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 RASGEF1AQ8N9B8 481 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 OR10G6Q8NH81 332 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 KCNE4Q8WWG9 221 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 UCK1Q9HA47 277 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 AKAP7Q9P0M2 348 aaPredicted RBP14.21□□□□□ -0.14
COL27A1-203ENST00000468565 CPNE7Q9UBL6 633 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 FKBPLQ9UIM3 349 aa14.21□□□□□ -0.14
COL27A1-203ENST00000468565 ERI2A8K979 691 aaKnown RBP14.2□□□□□ -0.14
COL27A1-203ENST00000468565 AGAP14A8MT82 685 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 GPR39O43194 453 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 DUX1O43812 170 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 JMJD7P0C870 316 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 CSF2RBP32927 897 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 CA5AP35218 305 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 XIAPP98170 497 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 GPS1Q13098 491 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 DSG2Q14126 1118 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 MORF4L2Q15014 288 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 NKAIN2Q5VXU1 208 aa14.2□□□□□ -0.14
COL27A1-203ENST00000468565 TMEM71Q6P5X7 295 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms