RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 VAV2P52735 878 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 PPP2R5EQ16537 467 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 ZNF789Q5FWF6 425 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 SIRPB2Q5JXA9 342 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 TMTC4Q5T4D3 741 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 ZDHHC20Q5W0Z9 365 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 KDELC1Q6UW63 502 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 FAM198BQ6UWH4 519 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 HPS6Q86YV9 775 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 RHOT1Q8IXI2 618 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 GLIS1Q8NBF1 620 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 PRR7Q8TB68 274 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 ZFPM2Q8WW38 1151 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 CTNNBL1Q8WYA6 563 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-207ENST00000468385 CPT1BQ92523 772 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 PNPLA2Q96AD5 504 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 TCTN2Q96GX1 697 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 C12orf66Q96MD2 445 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 SMAD5Q99717 465 aaKnown RBP12.74□□□□□ -0.37
PTPN7-207ENST00000468385 TLR10Q9BXR5 811 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 MAK16Q9BXY0 300 aaKnown RBP12.74□□□□□ -0.37
PTPN7-207ENST00000468385 SLC29A3Q9BZD2 475 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 KIR3DX1Q9H7L2 352 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 PCMTD2Q9NV79 361 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 SOHLH2Q9NX45 425 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.74□□□□□ -0.37
PTPN7-207ENST00000468385 FAM153AQ9UHL3 310 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 SLC24A2Q9UI40 661 aa12.74□□□□□ -0.37
PTPN7-207ENST00000468385 ERRFI1Q9UJM3 462 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-207ENST00000468385 MGAT4DA6NG13 374 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 A6NL46 340 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 BUD23O43709 281 aaKnown RBP12.73□□□□□ -0.37
PTPN7-207ENST00000468385 GYPCP04921 128 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 ZFXP17010 805 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-207ENST00000468385 DCTP40126 519 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 WNT3AP56704 352 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 FANCCQ00597 558 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 ITGA9Q13797 1035 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 MESDQ14696 234 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 PRKD1Q15139 912 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-207ENST00000468385 FNBP1LQ5T0N5 605 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 ARMC6Q6NXE6 501 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 MED25Q71SY5 747 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 MAMDC2Q7Z304 686 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-207ENST00000468385 GLT6D1Q7Z4J2 308 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 RFX6Q8HWS3 928 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 SLC25A41Q8N5S1 370 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 TMEM102Q8N9M5 508 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-207ENST00000468385 OR1L3Q8NH93 324 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 NAT14Q8WUY8 206 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 C19orf60Q96EN9 201 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 MRGPRX2Q96LB1 330 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 SMOXQ9NWM0 555 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 GPR83Q9NYM4 423 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 LUC7L2Q9Y383 392 aaKnown RBP12.73□□□□□ -0.37
PTPN7-207ENST00000468385 MYO9AB2RTY4 2548 aa12.73□□□□□ -0.37
PTPN7-207ENST00000468385 CSMD1Q96PZ7 3565 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 SLC9B1P1A6NJY1 282 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 ENO4A6NNW6 628 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 KRT86O43790 486 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 LDLRP01130 860 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 EPOP01588 193 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 POLR2CP19387 275 aaPredicted RBP12.72□□□□□ -0.37
PTPN7-207ENST00000468385 NFKB1P19838 968 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 VARSP26640 1264 aaKnown RBP12.72□□□□□ -0.37
PTPN7-207ENST00000468385 DYNLT1P63172 113 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 WASHC5Q12768 1159 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 ATP1A4Q13733 1029 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 PTPRCAPQ14761 206 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 SLC1A5Q15758 541 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 LONRF2Q1L5Z9 754 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 DET1Q7L5Y6 550 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 SYTL1Q8IYJ3 562 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 OR2L2Q8NH16 312 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 BLOC1S5Q8TDH9 187 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 SNRNP40Q96DI7 357 aaKnown RBP12.72□□□□□ -0.37
PTPN7-207ENST00000468385 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 CLIP3Q96DZ5 547 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 OXNAD1Q96HP4 312 aaPredicted RBP12.72□□□□□ -0.37
PTPN7-207ENST00000468385 LINC00615Q96LM1 132 aaPredicted RBP12.72□□□□□ -0.37
PTPN7-207ENST00000468385 RMDN2Q96LZ7 410 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 FANCEQ9HB96 536 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 HACD3Q9P035 362 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 MAP10Q9P2G4 905 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 POMT2Q9UKY4 750 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 ACSL5Q9ULC5 683 aa12.72□□□□□ -0.37
PTPN7-207ENST00000468385 G3BP2Q9UN86 482 aaKnown RBP12.72□□□□□ -0.37
PTPN7-207ENST00000468385 RP1L1Q8IWN7 2480 aaPredicted RBP12.71□□□□□ -0.37
PTPN7-207ENST00000468385 TMEM150CB9EJG8 249 aa12.71□□□□□ -0.37
PTPN7-207ENST00000468385 F5H423 210 aaPredicted RBP12.71□□□□□ -0.37
PTPN7-207ENST00000468385 GOLGA6L22H0YM25 854 aa12.71□□□□□ -0.37
PTPN7-207ENST00000468385 SGTAO43765 313 aa12.71□□□□□ -0.37
PTPN7-207ENST00000468385 CBX6O95503 412 aa12.71□□□□□ -0.37
PTPN7-207ENST00000468385 KRT1P04264 644 aa12.71□□□□□ -0.37
PTPN7-207ENST00000468385 TMEM253P0C7T8 217 aa12.71□□□□□ -0.37
PTPN7-207ENST00000468385 MSL3P1P0C860 447 aa12.71□□□□□ -0.37
PTPN7-207ENST00000468385 HLA-DPA1P20036 260 aa12.71□□□□□ -0.37
PTPN7-207ENST00000468385 MSH3P20585 1137 aa12.71□□□□□ -0.37
PTPN7-207ENST00000468385 CDH3P22223 829 aa12.71□□□□□ -0.37
PTPN7-207ENST00000468385 AKT1P31749 480 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms