RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 RMDN2Q96LZ7 410 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 FERD3LQ96RJ6 166 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 RANBP9Q96S59 729 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 CCNL2Q96S94 520 aaPredicted RBP11.28□□□□□ -0.6
CDHR3-205ENST00000468143 NRTNQ99748 197 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 COG4Q9H9E3 785 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 HOMER3Q9NSC5 361 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 ACSL6Q9UKU0 697 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 TCAF1Q9Y4C2 921 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 PCDHB11Q9Y5F2 797 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 MN1Q10571 1320 aaPredicted RBP11.28□□□□□ -0.6
CDHR3-205ENST00000468143 PKD1L2Q7Z442 2459 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 C17orf113A0A1B0GUU1 675 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 USP27XA6NNY8 438 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 B4E171 279 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 ZNF185O15231 689 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 KRT14P02533 472 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 ITGB6P18564 788 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 MGAT1P26572 445 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 TSPAN7P41732 249 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 CAPZBP47756 277 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 ARCN1P48444 511 aaKnown RBP11.27□□□□□ -0.61
CDHR3-205ENST00000468143 UCNP55089 124 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 SH3BP2P78314 561 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 PRAMEP78395 509 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 GPS1Q13098 491 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 LAMB3Q13751 1172 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 PCID2Q5JVF3 399 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 KIAA1614Q5VZ46 1190 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 CAPRIN2Q6IMN6 1127 aaKnown RBP11.27□□□□□ -0.61
CDHR3-205ENST00000468143 CES3Q6UWW8 571 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 C4orf22Q6V702 233 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 ZNF534Q76KX8 674 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 DTX1Q86Y01 620 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 OR4E2Q8NGC2 313 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 OR4L1Q8NH43 312 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 ZDHHC12Q96GR4 267 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 ELMO2Q96JJ3 720 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 DDA1Q9BW61 102 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 EIF2B3Q9NR50 452 aaKnown RBP11.27□□□□□ -0.61
CDHR3-205ENST00000468143 HRASLS2Q9NWW9 162 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 SLC24A2Q9UI40 661 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 PCDHGA3Q9Y5H0 932 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 UNC13CQ8NB66 2214 aa11.27□□□□□ -0.61
CDHR3-205ENST00000468143 CELSR3Q9NYQ7 3312 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 DMXL2Q8TDJ6 3036 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 KLHL33A6NCF5 533 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 OR6C74A6NCV1 312 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 STMND1H3BQB6 276 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 K7ENP7 123 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 POLR1CO15160 346 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-205ENST00000468143 KIF5CO60282 957 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 AVILO75366 819 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 AP2A2O94973 939 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 WT1P19544 449 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-205ENST00000468143 CD82P27701 267 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 NMBRP28336 390 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 COILP38432 576 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-205ENST00000468143 NSG1P42857 185 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 NPY2RP49146 381 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 CSE1LP55060 971 aaKnown RBP11.26□□□□□ -0.61
CDHR3-205ENST00000468143 ACVR1Q04771 509 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 PRKG2Q13237 762 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 ITIH4Q14624 930 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 ZNF658BQ4V348 819 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-205ENST00000468143 FASTKD1Q53R41 847 aaKnown RBP11.26□□□□□ -0.61
CDHR3-205ENST00000468143 MANEAQ5SRI9 462 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 INO80CQ6PI98 192 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-205ENST00000468143 FBXO38Q6PIJ6 1188 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 AFTPHQ6ULP2 937 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 ELMO1Q92556 727 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 ANP32BQ92688 251 aaKnown RBP11.26□□□□□ -0.61
CDHR3-205ENST00000468143 NKD1Q969G9 470 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 OR6C1Q96RD1 312 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 OSBPL9Q96SU4 736 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 MAP3K3Q99759 626 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 ASPSCR1Q9BZE9 553 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 B3GNT4Q9C0J1 378 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 OR52A5Q9H2C5 316 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 KIR3DX1Q9H7L2 352 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 VPS37BQ9H9H4 285 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 FBXO8Q9NRD0 319 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 BFARQ9NZS9 450 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 MARCH4Q9P2E8 410 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-205ENST00000468143 COLEC10Q9Y6Z7 277 aa11.26□□□□□ -0.61
CDHR3-205ENST00000468143 ACACAQ13085 2346 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 IGHV5-51A0A0C4DH38 117 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 TEX51A0A1B0GUA7 166 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 UBA6A0AVT1 1052 aaPredicted RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 OR5K3A6NET4 321 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 IQCF5A8MTL0 148 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 IFRD1O00458 451 aaPredicted RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 RAD1O60671 282 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 PRB1P04280 392 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 ANKRD34CP0C6C1 535 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 POLR2CP19387 275 aaPredicted RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 RAB15P59190 212 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 BOP1Q14137 746 aaKnown RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 KCNAB1Q14722 419 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms