RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 DNMT3AQ9Y6K1 912 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 HEATR9A2RTY3 570 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 A6NCN8 305 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 MROH6A6NGR9 719 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 LILRA5A6NI73 299 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 EFCAB7A8K855 629 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 ZNF891A8MT65 544 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 AGAP14A8MT82 685 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 TOX3O15405 576 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 KCNJ13O60928 360 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 VIPP01282 170 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 ANKRD34CP0C6C1 535 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 ITGB6P18564 788 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 XRCC1P18887 633 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 ADRA1DP25100 572 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 COILP38432 576 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 CSRP3P50461 194 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 ARSDP51689 593 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 SESN2P58004 480 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 MC1RQ01726 317 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 NFATC3Q12968 1075 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 LAMB3Q13751 1172 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 MAP7Q14244 749 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 CRTC2Q53ET0 693 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 TTC27Q6P3X3 843 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 CCDC137Q6PK04 289 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 ATG14Q6ZNE5 492 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 SERPINA9Q86WD7 417 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 RBM12BQ8IXT5 1001 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 NLGN4XQ8N0W4 816 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 NXPE1Q8N323 547 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 NLGN4YQ8NFZ3 816 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 ACTRT1Q8TDG2 376 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 HDAC10Q969S8 669 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 KIAA1143Q96AT1 154 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 ZNF514Q96K75 400 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 COPS8Q99627 209 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 SLC25A18Q9H1K4 315 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 ZDHHC3Q9NYG2 299 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 ZNF624Q9P2J8 865 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 PILRAQ9UKJ1 303 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 PSMD13Q9UNM6 376 aa13.78□□□□□ -0.2
CCHCR1-211ENST00000467553 CCDC162PA2VCL2 907 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 OR51F1A6NGY5 319 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 CFAP99D6REC4 459 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 H7C0S8 307 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 RAD1O60671 282 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 ATP1B2P14415 290 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 MPSTP25325 297 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 SLC19A1P41440 591 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 HALP42357 657 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 MAPK9P45984 424 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 NPY2RP49146 381 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 CACNG1Q06432 222 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 ABHD18Q0P651 414 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 GPS1Q13098 491 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 SRSF6Q13247 344 aaKnown RBP13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 NFE2L1Q14494 772 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 TSTD2Q5T7W7 516 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 ABRAXAS1Q6UWZ7 409 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 FAM129CQ86XR2 697 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 OR6P1Q8NGX9 317 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 HEXDCQ8WVB3 486 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 NCSTNQ92542 709 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 SLC45A3Q96JT2 553 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 ZNF778Q96MU6 729 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 RANBP9Q96S59 729 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 TBC1D10AQ9BXI6 508 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 SPRY4Q9C004 299 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 OCIAD1Q9NX40 245 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 SLC2A6Q9UGQ3 507 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 WDR37Q9Y2I8 494 aa13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 TMEM184BQ9Y519 407 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-211ENST00000467553 MN1Q10571 1320 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 TCRBV7S3A2A0A539 114 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 MGAT4DA6NG13 374 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 OR52A4PA6NMU1 304 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 CES2O00748 559 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 SUV39H1O43463 412 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 POLBP06746 335 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 LIFP15018 202 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 BRAFP15056 766 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 TCP1P17987 556 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 ACRV1P26436 265 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 UBE2IP63279 158 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 CRADDP78560 199 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 CLCA4Q14CN2 919 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 PCID2Q5JVF3 399 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 CYB5D1Q6P9G0 228 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 WASH2PQ6VEQ5 465 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 FAM83HQ6ZRV2 1179 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 PRICKLE2Q7Z3G6 844 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 PIANPQ8IYJ0 282 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 CFAP206Q8IYR0 622 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 PPHLN1Q8NEY8 458 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 CXorf40BQ96DE9 158 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 WASH6PQ9NQA3 447 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 EIF2B3Q9NR50 452 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 CHRAC1Q9NRG0 131 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 BFARQ9NZS9 450 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms