RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 RETP07949 1114 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 MMP2P08253 660 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 IL1RNP18510 177 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 STC1P52823 247 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 ITKQ08881 620 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 NPTX1Q15818 432 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 RBBP7Q16576 425 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 NKG7Q16617 165 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 TYSND1Q2T9J0 566 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 PLEKHG6Q3KR16 790 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 C6orf183Q5T699 404 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 MARC1Q5VT66 337 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 PAGE2Q7Z2X7 111 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 PLD3Q8IV08 490 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 SH3GL1Q99961 368 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 MMP27Q9H306 513 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 KAT8Q9H7Z6 458 aaKnown RBP19.45■□□□□ 0.7
SDF4-205ENST00000465727 TAS2R13Q9NYV9 303 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 TMEFF2Q9UIK5 374 aaPredicted RBP19.45■□□□□ 0.7
SDF4-205ENST00000465727 NEUROG3Q9Y4Z2 214 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 PRMT5O14744 637 aaPredicted RBP19.45■□□□□ 0.7
SDF4-205ENST00000465727 XPNPEP2O43895 674 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 RPP40O75818 363 aaKnown RBP19.45■□□□□ 0.7
SDF4-205ENST00000465727 PRDX3P30048 256 aaKnown RBP19.45■□□□□ 0.7
SDF4-205ENST00000465727 KRR1Q13601 381 aaKnown RBP19.45■□□□□ 0.7
SDF4-205ENST00000465727 KEAP1Q14145 624 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 ARTNQ5T4W7 220 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 GALNT13Q8IUC8 556 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 CNIH3Q8TBE1 160 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 FUBP1Q96AE4 644 aaKnown RBP19.45■□□□□ 0.7
SDF4-205ENST00000465727 TADA1Q96BN2 335 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 LGALS12Q96DT0 336 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 ZNF382Q96SR6 550 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 SMOC2Q9H3U7 446 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 TXNRD2Q9NNW7 524 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 POLE4Q9NR33 117 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 CATSPERZQ9NTU4 200 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 ERVK-18Q9QC07 812 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 RIMKLBQ9ULI2 386 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 NOX1Q9Y5S8 564 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 LOC285095A0A1B0GVY8 99 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 ILVBLA1L0T0 632 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 CD6P30203 668 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 HUNKP57058 714 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 LSM3P62310 102 aaKnown RBP19.44■□□□□ 0.7
SDF4-205ENST00000465727 RAPSNQ13702 412 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 TSNQ15631 228 aaKnown RBP19.44■□□□□ 0.7
SDF4-205ENST00000465727 LRIT3Q3SXY7 679 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 ZNF486Q96H40 463 aaPredicted RBP19.44■□□□□ 0.7
SDF4-205ENST00000465727 RBPJLQ9UBG7 517 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 A3GALT2U3KPV4 340 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 A0A0G2JLL6 359 aaPredicted RBP19.44■□□□□ 0.7
SDF4-205ENST00000465727 ELOVL7A1L3X0 281 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 E9PAM4 449 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 ATXN1LP0C7T5 689 aaKnown RBP19.44■□□□□ 0.7
SDF4-205ENST00000465727 TCEA1P23193 301 aaKnown RBP19.44■□□□□ 0.7
SDF4-205ENST00000465727 PSMB9P28065 219 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 ALDH4A1P30038 563 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 RCVRNP35243 200 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 NEK2P51955 445 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 NCS1P62166 190 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 CATSPEREQ5SY80 951 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 UBXN11Q5T124 520 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 CAPN13Q6MZZ7 669 aaPredicted RBP19.44■□□□□ 0.7
SDF4-205ENST00000465727 CYP20A1Q6UW02 462 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 Q6ZSR9 355 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 PRRT2Q7Z6L0 340 aaPredicted RBP19.44■□□□□ 0.7
SDF4-205ENST00000465727 B3GNT8Q7Z7M8 397 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 CHCHD4Q8N4Q1 142 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 NKAPQ8N5F7 415 aaKnown RBP19.44■□□□□ 0.7
SDF4-205ENST00000465727 MCFD2Q8NI22 146 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 FAM162AQ96A26 154 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 RHBDF1Q96CC6 855 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 ACOX2Q99424 681 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 ALOXE3Q9BYJ1 711 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.44■□□□□ 0.76e-10■■■□□ 15.9
SDF4-205ENST00000465727 GJA3Q9Y6H8 435 aa19.44■□□□□ 0.7
SDF4-205ENST00000465727 RHOBTB1O94844 696 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 NRIP1P48552 1158 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 IFITM2Q01629 132 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 DSC2Q02487 901 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 LAPTM5Q13571 262 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 PAQR3Q6TCH7 311 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 LRRC8DQ7L1W4 858 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 UMODL1-AS1Q8N2C9 162 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 OR4L1Q8NH43 312 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 FRS2Q8WU20 508 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 ZHX1-C8orf76Q96EF9 292 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 ACTL8Q9H568 366 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 AGO3Q9H9G7 860 aaKnown RBP19.43■□□□□ 0.7
SDF4-205ENST00000465727 DCAF13Q9NV06 445 aaKnown RBP19.43■□□□□ 0.7
SDF4-205ENST00000465727 UXTQ9UBK9 157 aaPredicted RBP19.43■□□□□ 0.7
SDF4-205ENST00000465727 IPPQ9Y573 584 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 KCTD3Q9Y597 815 aa19.43■□□□□ 0.7
SDF4-205ENST00000465727 PSMD11O00231 422 aa19.42■□□□□ 0.7
SDF4-205ENST00000465727 CXCR6O00574 342 aa19.42■□□□□ 0.7
SDF4-205ENST00000465727 ANKRD28O15084 1053 aa19.42■□□□□ 0.7
SDF4-205ENST00000465727 MAN1A2O60476 641 aa19.42■□□□□ 0.7
SDF4-205ENST00000465727 HOXD8P13378 290 aaPredicted RBP19.42■□□□□ 0.7
SDF4-205ENST00000465727 PCSK1P29120 753 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms