RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ZNF789Q5FWF6 425 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 SPANXN3Q5MJ09 141 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 NKAIN2Q5VXU1 208 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 ZNF470Q6ECI4 717 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 PTRHD1Q6GMV3 140 aaKnown RBP12.12□□□□□ -0.47
CHPF2-202ENST00000465601 UNC5AQ6ZN44 842 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 RBM44Q6ZP01 1051 aaKnown RBP12.12□□□□□ -0.47
CHPF2-202ENST00000465601 CENPUQ71F23 418 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 CILP2Q8IUL8 1156 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 DENND6AQ8IWF6 608 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 KRT222Q8N1A0 295 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 DCBLD1Q8N8Z6 715 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 WDR48Q8TAF3 677 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 LKAAEAR1Q8TD35 194 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 ELMO1Q92556 727 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 SH3KBP1Q96B97 665 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 LRRC39Q96DD0 335 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 C12orf66Q96MD2 445 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 GFM1Q96RP9 751 aaKnown RBP12.12□□□□□ -0.47
CHPF2-202ENST00000465601 TCF12Q99081 682 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 P2RY12Q9H244 342 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 PLAC1Q9HBJ0 212 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 IARS2Q9NSE4 1012 aaKnown RBP12.12□□□□□ -0.47
CHPF2-202ENST00000465601 KCNK4Q9NYG8 393 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 CRYL1Q9Y2S2 319 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 MSRB2Q9Y3D2 182 aa12.12□□□□□ -0.47
CHPF2-202ENST00000465601 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
CHPF2-202ENST00000465601 IGHV1OR21-1A0A087WYE8 117 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 ESYT3A0FGR9 886 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 E7ESA3 106 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 F8W8V4 182 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 PFDN6O15212 129 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 ZW10O43264 779 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 CSO75390 466 aaKnown RBP12.11□□□□□ -0.47
CHPF2-202ENST00000465601 S1PR4O95977 384 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 GSTM1P09488 218 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 SLC35G4P0C7Q5 338 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 RPS3P23396 243 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHPF2-202ENST00000465601 CD1CP29017 333 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 CCR7P32248 378 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 MAPK9P45984 424 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 CSE1LP55060 971 aaKnown RBP12.11□□□□□ -0.47
CHPF2-202ENST00000465601 GUCY2DQ02846 1103 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 GSTM4Q03013 218 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 BOP1Q14137 746 aaKnown RBP12.11□□□□□ -0.47
CHPF2-202ENST00000465601 FASTKD3Q14CZ7 662 aaKnown RBP12.11□□□□□ -0.47
CHPF2-202ENST00000465601 ISXQ2M1V0 245 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 CAPRIN2Q6IMN6 1127 aaKnown RBP12.11□□□□□ -0.47
CHPF2-202ENST00000465601 DUS1LQ6P1R4 473 aaKnown RBP12.11□□□□□ -0.47
CHPF2-202ENST00000465601 ZNF449Q6P9G9 518 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 TMEM26Q6ZUK4 368 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 KCNMB4Q86W47 210 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 CACTIN-AS1Q8N1I8 211 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 AVL9Q8NBF6 648 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 FBXO36Q8NEA4 188 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 FBXO25Q8TCJ0 367 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 CALML6Q8TD86 181 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 LPGAT1Q92604 370 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 ART4Q93070 314 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 DEPDC7Q96QD5 511 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 CARD6Q9BX69 1037 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 TBC1D10AQ9BXI6 508 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 OR52A5Q9H2C5 316 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 RDH14Q9HBH5 336 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 SLC40A1Q9NP59 571 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 SAYSD1Q9NPB0 183 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 FBXO6Q9NRD1 293 aaPredicted RBP12.11□□□□□ -0.47
CHPF2-202ENST00000465601 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
CHPF2-202ENST00000465601 GNPTGQ9UJJ9 305 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 FBXO5Q9UKT4 447 aa12.11□□□□□ -0.47
CHPF2-202ENST00000465601 ANKRD11Q6UB99 2663 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-202ENST00000465601 SLC5A10A0PJK1 596 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 D6RAR5 112 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 LIN7AO14910 233 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-202ENST00000465601 TCEA3O75764 348 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 MTHFD1P11586 935 aaKnown RBP12.1□□□□□ -0.47
CHPF2-202ENST00000465601 SLC1A2P43004 574 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 MPP1Q00013 466 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 CAV1Q03135 178 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 CFHR1Q03591 330 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 RPA4Q13156 261 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 GPR18Q14330 331 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 CTSL3PQ5NE16 218 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 RNF187Q5TA31 235 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-202ENST00000465601 STEAP4Q687X5 459 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 TRMT10BQ6PF06 316 aaKnown RBP12.1□□□□□ -0.47
CHPF2-202ENST00000465601 ZDHHC24Q6UX98 284 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 TMPRSS9Q7Z410 1059 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 B3GNT8Q7Z7M8 397 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 PIM3Q86V86 326 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 LRRC6Q86X45 466 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 ZBED8Q8IZ13 594 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 CEP112Q8N8E3 955 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 PHC3Q8NDX5 983 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 OR10G6Q8NH81 332 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 JPH3Q8WXH2 748 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-202ENST00000465601 AHCYL2Q96HN2 611 aaKnown RBP12.1□□□□□ -0.47
CHPF2-202ENST00000465601 BIRC8Q96P09 236 aa12.1□□□□□ -0.47
CHPF2-202ENST00000465601 NUDT22Q9BRQ3 303 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms