RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 C1QTNF12Q5T7M4 302 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 CHST3Q7LGC8 479 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 CCDC186Q7Z3E2 898 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 GALNTL5Q7Z4T8 443 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 DNAJB7Q7Z6W7 309 aaPredicted RBP4.53□□□□□ -1.68
USP25-207ENST00000464435 DCP1BQ8IZD4 617 aaKnown RBP4.53□□□□□ -1.68
USP25-207ENST00000464435 RNF113BQ8IZP6 322 aaKnown RBP4.53□□□□□ -1.68
USP25-207ENST00000464435 ZNF441Q8N8Z8 693 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 PPP4R1Q8TF05 950 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 ADGRG7Q96K78 797 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 FAM81BQ96LP2 452 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 CFAP57Q96MR6 1250 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 OR6C1Q96RD1 312 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 LRRC4Q9HBW1 653 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 TMEM30AQ9NV96 361 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 PRAG1Q86YV5 1406 aa4.53□□□□□ -1.68
USP25-207ENST00000464435 ANKUB1A6NFN9 424 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 C5orf60A6NFR6 353 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 LILRA5A6NI73 299 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 EIF3DO15371 548 aaKnown RBP eCLIP4.52□□□□□ -1.69
USP25-207ENST00000464435 XRCC3O43542 346 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 CCDC175P0C221 793 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 PLA2G2AP14555 144 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 PFKFB1P16118 471 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 CYP11B2P19099 503 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 PTAFRP25105 342 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 PEX5P50542 639 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 TUBA1BP68363 451 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 CDK3Q00526 305 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 PNRC1Q12796 327 aaPredicted RBP4.52□□□□□ -1.69
USP25-207ENST00000464435 GAGE2BQ13066 116 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 ZNF234Q14588 700 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 GAGE2EQ4V326 116 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 STXBP5Q5T5C0 1151 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 RNASEH2BQ5TBB1 312 aaKnown RBP4.52□□□□□ -1.69
USP25-207ENST00000464435 NADSYN1Q6IA69 706 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 GAGE2AQ6NT46 116 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 FAM122CQ6P4D5 195 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 TRAT1Q6PIZ9 186 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 ASB18Q6ZVZ8 466 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 THNSL1Q8IYQ7 743 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 GBGT1Q8N5D6 347 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 LILRB1Q8NHL6 650 aaPredicted RBP4.52□□□□□ -1.69
USP25-207ENST00000464435 KIF18AQ8NI77 898 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 PHF21AQ96BD5 680 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 HDAC11Q96DB2 347 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 SIPA1Q96FS4 1042 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 FNDC11Q9BVV2 318 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 TM6SF1Q9BZW5 370 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 LRMDAQ9H2I8 198 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 NOL11Q9H8H0 719 aaKnown RBP4.52□□□□□ -1.69
USP25-207ENST00000464435 HHATLQ9HCP6 504 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 CHCHD3Q9NX63 227 aaKnown RBP4.52□□□□□ -1.69
USP25-207ENST00000464435 MALT1Q9UDY8 824 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 GAGE2DQ9UEU5 116 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 DDX25Q9UHL0 483 aaKnown RBP4.52□□□□□ -1.69
USP25-207ENST00000464435 TUBE1Q9UJT0 475 aa4.52□□□□□ -1.69
USP25-207ENST00000464435 TRIM77I1YAP6 450 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 OR10H2O60403 315 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 WDR1O75083 606 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 CAMTA2O94983 1202 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 FYNP06241 537 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 LINGO3P0C6S8 592 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 FAM106CPP0CH98 169 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 GNL1P36915 607 aaPredicted RBP4.51□□□□□ -1.69
USP25-207ENST00000464435 AMPHP49418 695 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 NPY4RP50391 375 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 RAB28P51157 221 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 DSCR9P59020 149 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 PLIN5Q00G26 463 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 PLA2G7Q13093 441 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 PRKAA1Q13131 559 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 TNIP1Q15025 636 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 SF3B4Q15427 424 aaKnown RBP eCLIP4.51□□□□□ -1.69
USP25-207ENST00000464435 HYAL4Q2M3T9 481 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 VWC2Q2TAL6 325 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 TMEM35AQ53FP2 167 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 ARMC4Q5T2S8 1044 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 OR7E24Q6IFN5 339 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 DCLRE1AQ6PJP8 1040 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 ZNF704Q6ZNC4 412 aaPredicted RBP4.51□□□□□ -1.69
USP25-207ENST00000464435 CREB3L2Q70SY1 520 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 ANKRD23Q86SG2 305 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 RBM23Q86U06 439 aaKnown RBP4.51□□□□□ -1.69
USP25-207ENST00000464435 SMPDL3BQ92485 455 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 SEMA4DQ92854 862 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 SPDL1Q96EA4 605 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 OXNAD1Q96HP4 312 aaPredicted RBP4.51□□□□□ -1.69
USP25-207ENST00000464435 NUP85Q9BW27 656 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 MOV10L1Q9BXT6 1211 aaKnown RBP4.51□□□□□ -1.69
USP25-207ENST00000464435 MIOSQ9NXC5 875 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 NPAP1Q9NZP6 1156 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 PROCRQ9UNN8 238 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 VDAC3Q9Y277 283 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 DLGAP4Q9Y2H0 992 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 PCDHAC2Q9Y5I4 1007 aa4.51□□□□□ -1.69
USP25-207ENST00000464435 ZCWPW2A0A1B0GU75 182 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 HNRNPCL2B2RXH8 293 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 IPO8O15397 1037 aaKnown RBP4.5□□□□□ -1.69
USP25-207ENST00000464435 ZNHIT1O43257 154 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms