RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SAMD15Q9P1V8 674 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 FAM8A1Q9UBU6 413 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 SNX24Q9Y343 169 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 FAM169AQ9Y6X4 670 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 PKD1L2Q7Z442 2459 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 IGHV5-10-1A0A0J9YXX1 117 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 FAM187AA6NFU0 413 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 EFCAB8A8MWE9 144 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 BHMG1C9JSJ3 638 aaPredicted RBP17.29■□□□□ 0.36
VPS52-214ENST00000463486 SMAPO00193 183 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 QSOX1O00391 747 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 PRMT5O14744 637 aaPredicted RBP17.29■□□□□ 0.36
VPS52-214ENST00000463486 RPS3P23396 243 aaKnown RBP eCLIP17.29■□□□□ 0.36
VPS52-214ENST00000463486 CCR7P32248 378 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 HALP42357 657 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 PREPP48147 710 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 LSSP48449 732 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 INHBCP55103 352 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 CYP4F3Q08477 520 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 RPA4Q13156 261 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 ZNF789Q5FWF6 425 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 DUPD1Q68J44 220 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 DUS1LQ6P1R4 473 aaKnown RBP17.29■□□□□ 0.36
VPS52-214ENST00000463486 NAPRTQ6XQN6 538 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 CILP2Q8IUL8 1156 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 RBM12BQ8IXT5 1001 aaKnown RBP17.29■□□□□ 0.36
VPS52-214ENST00000463486 ZNF669Q96BR6 464 aaPredicted RBP17.29■□□□□ 0.36
VPS52-214ENST00000463486 STAMBPL1Q96FJ0 436 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 LIN37Q96GY3 246 aaPredicted RBP17.29■□□□□ 0.36
VPS52-214ENST00000463486 TCF12Q99081 682 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 TTC1Q99614 292 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 CARD6Q9BX69 1037 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 GRHL1Q9NZI5 618 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 CDYLQ9Y232 598 aa17.29■□□□□ 0.36
VPS52-214ENST00000463486 CFAP20Q9Y6A4 193 aaKnown RBP17.29■□□□□ 0.36
VPS52-214ENST00000463486 IQCF5A8MTL0 148 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 LIN7AO14910 233 aaPredicted RBP17.28■□□□□ 0.36
VPS52-214ENST00000463486 GPC4O75487 556 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 S1PR4O95977 384 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 MPOP05164 745 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 OR56A5P0C7T3 313 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 ACADLP28330 430 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 LIMK2P53671 638 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 ADARP55265 1226 aaKnown RBP17.28■□□□□ 0.36
VPS52-214ENST00000463486 BIRC2Q13490 618 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 CTSL3PQ5NE16 218 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 MRNIPQ6NTE8 343 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 TMEM71Q6P5X7 295 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 WDR74Q6RFH5 385 aaPredicted RBP17.28■□□□□ 0.36
VPS52-214ENST00000463486 IGF2-ASQ6U949 168 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 MAATS1Q7Z4T9 603 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 OR4D9Q8NGE8 314 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 CXorf40BQ96DE9 158 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 STN1Q9H668 368 aaKnown RBP17.28■□□□□ 0.36
VPS52-214ENST00000463486 VPS37BQ9H9H4 285 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 POLR1BQ9H9Y6 1135 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 EPB41L5Q9HCM4 733 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 IMP3Q9NV31 184 aaKnown RBP17.28■□□□□ 0.36
VPS52-214ENST00000463486 ANAPC5Q9UJX4 755 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 MAD1L1Q9Y6D9 718 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 TEX264Q9Y6I9 313 aa17.28■□□□□ 0.36
VPS52-214ENST00000463486 E7ESA3 106 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 ZW10O43264 779 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 DXOO77932 396 aaKnown RBP17.27■□□□□ 0.36
VPS52-214ENST00000463486 URI1O94763 535 aaPredicted RBP17.27■□□□□ 0.36
VPS52-214ENST00000463486 FTH1P02794 183 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 TUBB4AP04350 444 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 F7P08709 466 aaPredicted RBP17.27■□□□□ 0.36
VPS52-214ENST00000463486 THRAP10827 490 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 PGAM1P18669 254 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 PAMP19021 973 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 OGNP20774 298 aaKnown RBP17.27■□□□□ 0.36
VPS52-214ENST00000463486 MPSTP25325 297 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 AOAHP28039 575 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 PPARGP37231 505 aaPredicted RBP17.27■□□□□ 0.36
VPS52-214ENST00000463486 CD151P48509 253 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 CRYMQ14894 314 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 C16orf72Q14CZ0 275 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 TRADDQ15628 312 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 LONRF1Q17RB8 773 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 TRIM48Q8IWZ4 208 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 OR10G6Q8NH81 332 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 ZFPM2Q8WW38 1151 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 NXPE2Q96DL1 559 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 C12orf66Q96MD2 445 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 TMEM74Q96NL1 305 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 EPB41L1Q9H4G0 881 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 ASCL3Q9NQ33 180 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 WHRNQ9P202 907 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 SATB2Q9UPW6 733 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 PCDHGA8Q9Y5G5 932 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 MRFAP1Q9Y605 127 aa17.27■□□□□ 0.36
VPS52-214ENST00000463486 ITPR1Q14643 2758 aa17.27■□□□□ 0.35
VPS52-214ENST00000463486 CCDC187A0A096LP49 1063 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 TMEM8BA6NDV4 472 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 TMX2-CTNND1H3BSU7 103 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 BRINP1O60477 761 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 NDUFS3O75489 264 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 C9P02748 559 aa17.26■□□□□ 0.35
VPS52-214ENST00000463486 SLC35G4P0C7Q5 338 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms