RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 SLC39A12Q504Y0 691 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 XAF1Q6GPH4 301 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 C8orf82Q6P1X6 216 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 SPRED1Q7Z699 444 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 ADCK1Q86TW2 530 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 ALDH16A1Q8IZ83 802 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.26□□□□□ -0.452e-6■■■■■ 53.6
HDAC4-208ENST00000463007 CCDC97Q96F63 343 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 IMP4Q96G21 291 aaKnown RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 SERPINB11Q96P15 392 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 RMI1Q9H9A7 625 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 NTN4Q9HB63 628 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 INTS10Q9NVR2 710 aaKnown RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 ABCD2Q9UBJ2 740 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 ADGRE2Q9UHX3 823 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 POU2F3Q9UKI9 436 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 PDE10AQ9Y233 779 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 GPR45Q9Y5Y3 372 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 NINQ8N4C6 2090 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 BBIP1A8MTZ0 92 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 NDUFS3O75489 264 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 FCGR1AP12314 374 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 NCS1P62166 190 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 CD47Q08722 323 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 VAC14Q08AM6 782 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 LCP2Q13094 533 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 DAG1Q14118 895 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 SLC14A2Q15849 920 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 INAQ16352 499 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 CTU2Q2VPK5 515 aaKnown RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 AASDHQ4L235 1098 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 PRMT9Q6P2P2 845 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 MON1AQ86VX9 555 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 ZCCHC7Q8N3Z6 543 aaKnown RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 ZNF555Q8NEP9 628 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 ZNF420Q8TAQ5 688 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-208ENST00000463007 OSCP1Q8WVF1 389 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 PPP1R2P1Q96PQ5 205 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 CD320Q9NPF0 282 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 TMEM248Q9NWD8 314 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 MTRRQ9UBK8 725 aa12.26□□□□□ -0.45
HDAC4-208ENST00000463007 HTR3EA5X5Y0 456 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 PRKD3O94806 890 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 FADS2O95864 444 aaKnown RBP12.25□□□□□ -0.45
HDAC4-208ENST00000463007 B3GALT4O96024 378 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 SLC2A4P14672 509 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 GDF5P43026 501 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 SMN1Q16637 294 aaKnown RBP12.25□□□□□ -0.45
HDAC4-208ENST00000463007 TIGD7Q6NT04 549 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-208ENST00000463007 SLC24A5Q71RS6 500 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 DET1Q7L5Y6 550 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 TAS2R42Q7RTR8 314 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 CADM3Q8N126 398 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 CRIPAKQ8N1N5 446 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 PACRGLQ8N7B6 248 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 OR7A2PQ8NGA2 310 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 OR4K2Q8NGD2 314 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 RPL3LQ92901 407 aaKnown RBP12.25□□□□□ -0.45
HDAC4-208ENST00000463007 BHMTQ93088 406 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 RPRD1AQ96P16 312 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-208ENST00000463007 RIBC2Q9H4K1 309 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 TCRBV5S2A0A599 114 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 CLDN25C9JDP6 229 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 TLR5O60602 858 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 OXSR1O95747 527 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-208ENST00000463007 INHBBP09529 407 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 CRHBPP24387 322 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 TTKP33981 857 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 RENBPP51606 427 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 HMGCS1Q01581 520 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 IFITM3Q01628 133 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 FAM98BQ52LJ0 330 aaKnown RBP12.25□□□□□ -0.45
HDAC4-208ENST00000463007 MS4A13Q5J8X5 152 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 MFSD4BQ5TF39 518 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 ARMCX6Q7L4S7 300 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 GALNT7Q86SF2 657 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 PHYKPLQ8IUZ5 450 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 SLC22A15Q8IZD6 547 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 LGI2Q8N0V4 545 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 TTC9BQ8N6N2 239 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 CDC26Q8NHZ8 85 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 UBE2FQ969M7 185 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 TRMOQ9BU70 441 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 APOL5Q9BWW9 433 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 ALOXE3Q9BYJ1 711 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 CATSPERZQ9NTU4 200 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 KLQ9UEF7 1012 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 LEF1Q9UJU2 399 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-208ENST00000463007 ZNF225Q9UK10 706 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 CDH7Q9ULB5 785 aa12.25□□□□□ -0.45
HDAC4-208ENST00000463007 A8MX80 341 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 UPK3BL1B0FP48 263 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 UPK3BL2E5RIL1 263 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 CAPN1P07384 714 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 EFNA1P20827 205 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-208ENST00000463007 GRK4P32298 578 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 ACLYP53396 1101 aa12.24□□□□□ -0.45
HDAC4-208ENST00000463007 ADARB1P78563 741 aaKnown RBP12.24□□□□□ -0.45
HDAC4-208ENST00000463007 PRKG2Q13237 762 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms