RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 UMODL1-AS1Q8N2C9 162 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 LEMD2Q8NC56 503 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 WBP2Q969T9 261 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 TCEAL4Q96EI5 215 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 P2RY11Q96G91 374 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 RPRD1AQ96P16 312 aaPredicted RBP7.4□□□□□ -1.22
UBE4B-204ENST00000462658 DDX50Q9BQ39 737 aaKnown RBP7.4□□□□□ -1.22
UBE4B-204ENST00000462658 FUT8Q9BYC5 575 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 SLC39A8Q9C0K1 460 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 TMEM248Q9NWD8 314 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 PIH1D1Q9NWS0 290 aaKnown RBP7.4□□□□□ -1.22
UBE4B-204ENST00000462658 ZDHHC7Q9NXF8 308 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 ETAA1Q9NY74 926 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 SEPT10Q9P0V9 454 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 AGO1Q9UL18 857 aaKnown RBP7.4□□□□□ -1.22
UBE4B-204ENST00000462658 PCDHGB6Q9Y5F9 930 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 HS3ST3A1Q9Y663 406 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 CLUHO75153 1309 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 ZNF638Q14966 1978 aaKnown RBP7.4□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF197O14709 1029 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 TRDMT1O14717 391 aaKnown RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 MAP2K7O14733 419 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 TP73O15350 636 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 TSPAN3O60637 253 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 MOSPD3O75425 235 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 SUN1O94901 812 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CHEK2O96017 543 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CCNCP24863 283 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 SLC7A1P30825 629 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CHKAP35790 457 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 HSPA9P38646 679 aaKnown RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 PAPOLAP51003 745 aaKnown RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 NDST2P52849 883 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 POU6F2P78424 691 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 NTHL1P78549 312 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 BASP1P80723 227 aaKnown RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 SLC7A9P82251 487 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 MXRA7P84157 204 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 ZXDBP98169 803 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF33AQ06730 810 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 PPIDQ08752 370 aaKnown RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 BOP1Q14137 746 aaKnown RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 SLMAPQ14BN4 828 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 MORF4L2Q15014 288 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 TEAD2Q15562 447 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CD300EQ496F6 205 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 C5orf22Q49AR2 442 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 RABGAP1LQ5R372 815 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 ANKRD20A2Q5SQ80 823 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 FAM182AQ5T1J6 154 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 STXBP5Q5T5C0 1151 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 RNASEH2BQ5TBB1 312 aaKnown RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 ANKRD20A1Q5TYW2 823 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 ANKRD20A3Q5VUR7 823 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 GRASPQ7Z6J2 395 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 TFAP2DQ7Z6R9 452 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CCDC25Q86WR0 208 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 LRRC49Q8IUZ0 686 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CCDC13Q8IYE1 715 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 MREGQ8N565 214 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CCDC110Q8TBZ0 833 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 DEPDC1BQ8WUY9 529 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 ASB10Q8WXI3 467 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CPT1BQ92523 772 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 TMEM125Q96AQ2 219 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF707Q96C28 371 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 HDAC11Q96DB2 347 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 BOD1Q96IK1 185 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 TSGA13Q96PP4 275 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CDCA3Q99618 268 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CNPPD1Q9BV87 410 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 TSPYL1Q9H0U9 437 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 RETREG1Q9H6L5 497 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 TASP1Q9H6P5 420 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 STOML2Q9UJZ1 356 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 LSM7Q9UK45 103 aaKnown RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 FAM50BQ9Y247 325 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF510Q9Y2H8 683 aa7.39□□□□□ -1.23
UBE4B-204ENST00000462658 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 ZFP37Q9Y6Q3 630 aaPredicted RBP7.39□□□□□ -1.23
UBE4B-204ENST00000462658 CUL9Q8IWT3 2517 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 TTC28Q96AY4 2481 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 ARHGAP42A6NI28 874 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 RASA4BC9J798 803 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 KCNK1O00180 336 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 RNF103O00237 685 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 TOR1BO14657 336 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 RASA4O43374 803 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 PPFIA2O75334 1257 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 CLDN11O75508 207 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 METTL18O95568 372 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 PTPN3P26045 913 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 OR1E1P30953 314 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 FDFT1P37268 417 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 AVPR1AP37288 418 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 GNALP38405 381 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 CDH4P55283 916 aa7.38□□□□□ -1.23
UBE4B-204ENST00000462658 YBEYP58557 167 aaPredicted RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 RPS24P62847 133 aaKnown RBP7.38□□□□□ -1.23
UBE4B-204ENST00000462658 ZXDAP98168 799 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms