RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 FAM71AQ8IYT1 594 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 DCP1BQ8IZD4 617 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ARHGAP18Q8N392 663 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 SMRP1Q8NCR6 262 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 MSANTD4Q8NCY6 345 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CFAP61Q8NHU2 1237 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF606Q8WXB4 792 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 SUSD6Q92537 303 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 GOLGA1Q92805 767 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CASP10Q92851 521 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 RMDN1Q96DB5 314 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC46A1Q96NT5 459 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 LRRC3BQ96PB8 259 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ERGIC2Q96RQ1 377 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 NELL2Q99435 816 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC39A3Q9BRY0 314 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CCDC28BQ9BUN5 200 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 PLA2G2FQ9BZM2 168 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 TTYH3Q9C0H2 523 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 MIS12Q9H081 205 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF768Q9H5H4 540 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 SYNCQ9H7C4 482 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 SFXN1Q9H9B4 322 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 NMUR1Q9HB89 426 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 DMAP1Q9NPF5 467 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 OSER1Q9NX31 292 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 TAS2R14Q9NYV8 317 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 KIF17Q9P2E2 1029 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 DKK4Q9UBT3 224 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CCL26Q9Y258 94 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CARD8Q9Y2G2 431 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CRYL1Q9Y2S2 319 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 C15orf41Q9Y2V0 281 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 SH3GLB1Q9Y371 365 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CHST2Q9Y4C5 530 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 TECTAO75443 2155 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CEP250Q9BV73 2442 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 DENND4AQ7Z401 1863 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 LRRD1A4D1F6 860 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 ANTXRLA6NF34 631 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 DIRC3C9JPN6 131 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 PROB1E7EW31 1015 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 M0QYV0 167 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 RNASET2O00584 256 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 EIF3HO15372 352 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 DIAPH2O60879 1101 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 GRAP2O75791 330 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 PRAMEF12O95522 483 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 GSTA2P09210 222 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CKMT1AP12532 417 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CPA3P15088 417 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CYP11B1P15538 503 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 NPPBP16860 134 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 POLR2EP19388 210 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 S100A1P23297 94 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 TBXAS1P24557 533 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 APOBEC3AP31941 199 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CASP14P31944 242 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 PTDSS1P48651 473 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CCNG1P51959 295 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 MFAP3P55082 362 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 PITX1P78337 314 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 ZXDBP98169 803 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 ADIGQ0VDE8 80 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CETN1Q12798 172 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 KIF5AQ12840 1032 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 TAF10Q12962 218 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 ZBTB17Q13105 803 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CBX3Q13185 183 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 LEXMQ3ZCV2 418 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 RAB6CQ53S08 254 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 FAM78AQ5JUQ0 283 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 ARHGAP17Q68EM7 881 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 PDXDC1Q6P996 788 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 DRICH1Q6PGQ1 229 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 PARM1Q6UWI2 310 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 BHLHA9Q7RTU4 235 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 GDF7Q7Z4P5 450 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 IRF2BP2Q7Z5L9 587 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 KCTD20Q7Z5Y7 419 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 SCD5Q86SK9 330 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 UNC93AQ86WB7 457 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 VSTM4Q8IW00 320 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CCDC28AQ8IWP9 274 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 GPR65Q8IYL9 337 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CFAP52Q8N1V2 620 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 C1orf131Q8NDD1 294 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 BEND2Q8NDZ0 799 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC30A5Q8TAD4 765 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 GABPB2Q8TAK5 448 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CCDC110Q8TBZ0 833 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 MAIP1Q8WWC4 291 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 IFT81Q8WYA0 676 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 FGF13Q92913 245 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 TBC1D31Q96DN5 1066 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 SMARCD1Q96GM5 515 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CPXM1Q96SM3 734 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CDCA3Q99618 268 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CHP1Q99653 195 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 HNRNPABQ99729 332 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms