RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 ARHGEF7Q14155 803 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 LPCAT2Q7L5N7 544 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 ZFAND4Q86XD8 727 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 PIH1D2Q8WWB5 315 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 TMEM175Q9BSA9 504 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 CHID1Q9BWS9 393 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 BRINP2Q9C0B6 783 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 TCRBV5S2A0A599 114 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 GAPDHSO14556 408 aaPredicted RBP17.85■□□□□ 0.45
HPS3-202ENST00000460120 LSM1O15116 133 aaKnown RBP17.85■□□□□ 0.45
HPS3-202ENST00000460120 DFNA5O60443 496 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 ZNF7P17097 686 aaPredicted RBP17.85■□□□□ 0.45
HPS3-202ENST00000460120 PDCD4Q53EL6 469 aaKnown RBP17.85■□□□□ 0.45
HPS3-202ENST00000460120 EFL1Q7Z2Z2 1120 aaKnown RBP17.85■□□□□ 0.45
HPS3-202ENST00000460120 KRTCAP2Q8N6L1 136 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 CWH43Q9H720 699 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 CLK4Q9HAZ1 481 aaKnown RBP17.85■□□□□ 0.45
HPS3-202ENST00000460120 PTTG2Q9NZH5 202 aa17.85■□□□□ 0.45
HPS3-202ENST00000460120 RAD51BO15315 384 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 CLOCKO15516 846 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 CKMP06732 381 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 CDH2P19022 906 aaPredicted RBP17.84■□□□□ 0.45
HPS3-202ENST00000460120 CTSOP43234 321 aaPredicted RBP17.84■□□□□ 0.45
HPS3-202ENST00000460120 CLCN4P51793 760 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 MAPK10P53779 464 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 MTA1Q13330 715 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 NFATC2Q13469 925 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 ZSWIM9Q86XI8 627 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 FBXO30Q8TB52 745 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 MYLIPQ8WY64 445 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 TSEN34Q9BSV6 310 aaKnown RBP17.84■□□□□ 0.45
HPS3-202ENST00000460120 C9orf16Q9BUW7 83 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 THUMPD3Q9BV44 507 aaKnown RBP17.84■□□□□ 0.45
HPS3-202ENST00000460120 C1QTNF3Q9BXJ4 246 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 HIPK3Q9H422 1215 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 EPB41L1Q9H4G0 881 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.84■□□□□ 0.45
HPS3-202ENST00000460120 PHF24Q9UPV7 400 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 ZFC3H1O60293 1989 aaKnown RBP17.84■□□□□ 0.45
HPS3-202ENST00000460120 ANKRD33BA6NCL7 494 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 HOXA2O43364 376 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 BPIP17213 487 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 IST1P53990 364 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 ADAMTSL2Q86TH1 951 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 DTWD1Q8N5C7 304 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 FAM86B1Q8N7N1 296 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 OR10Q1Q8NGQ4 319 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 ADAMTS19Q8TE59 1207 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 NSMCE2Q96MF7 247 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 PRM3Q9NNZ6 103 aa17.84■□□□□ 0.45
HPS3-202ENST00000460120 SCN5AQ14524 2016 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 CROCCQ5TZA2 2017 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 ACOX3O15254 700 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 FZD6O60353 706 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 RFC2P35250 354 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 TRAF3Q13114 568 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 LAPTM5Q13571 262 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 ATP6AP1Q15904 470 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 FAM174BQ3ZCQ3 159 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 GTDC1Q4AE62 458 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 CREBZFQ9NS37 354 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 CD84Q9UIB8 345 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 FADS3Q9Y5Q0 445 aa17.83■□□□□ 0.45
HPS3-202ENST00000460120 B3GALT4O96024 378 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 LDLRP01130 860 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 CD70P32970 193 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 CPSF6Q16630 551 aaKnown RBP eCLIP17.83■□□□□ 0.44
HPS3-202ENST00000460120 IMPG1Q17R60 797 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 HID1Q8IV36 788 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 CRIPAKQ8N1N5 446 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 STK40Q8N2I9 435 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 HJURPQ8NCD3 748 aaPredicted RBP17.83■□□□□ 0.44
HPS3-202ENST00000460120 LRRC3Q9BY71 257 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 FAM126AQ9BYI3 521 aaPredicted RBP17.83■□□□□ 0.44
HPS3-202ENST00000460120 LTB4R2Q9NPC1 389 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 PFDN4Q9NQP4 134 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 ZIM2Q9NZV7 527 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 VAPAQ9P0L0 249 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 OPTCQ9UBM4 332 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 UTS2RQ9UKP6 389 aa17.83■□□□□ 0.44
HPS3-202ENST00000460120 GLYATL1P3A0A0U1RQE8 302 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 KANSL1LA0AUZ9 987 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 H0YJX3 145 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 NRG2O14511 850 aaPredicted RBP17.82■□□□□ 0.44
HPS3-202ENST00000460120 SEC22BO75396 215 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 OTCP00480 354 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 ASLP04424 464 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 ITGALP20701 1170 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 FOXM1Q08050 763 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 DLEU7Q6UYE1 221 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 CLVS1Q8IUQ0 354 aaPredicted RBP17.82■□□□□ 0.44
HPS3-202ENST00000460120 BBS7Q8IWZ6 715 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 PHACTR4Q8IZ21 702 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 SLC22A15Q8IZD6 547 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 LIX1Q8N485 282 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 OR10A6Q8NH74 314 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 ULK4Q96C45 1275 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 TMEM169Q96HH4 297 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 DCUN1D5Q9BTE7 237 aa17.82■□□□□ 0.44
HPS3-202ENST00000460120 THEGQ9P2T0 379 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms