RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 TNFRSF10BO14763 440 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 DDX3YO15523 660 aaKnown RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 SCELO95171 688 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 BPNT1O95861 308 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 PSMD8P48556 350 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 SCNN1GP51170 649 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 TSPAN5P62079 268 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 MRPS5P82675 430 aaKnown RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 RAB39AQ14964 217 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 FASTKD3Q14CZ7 662 aaKnown RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 PRKD1Q15139 912 aaPredicted RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 NIPAL1Q6NVV3 410 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 C11orf65Q8NCR3 313 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 SPPL2BQ8TCT7 592 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 KAT2AQ92830 837 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 SLC22A18Q96BI1 424 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 C1GALT1C1Q96EU7 318 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 RNF121Q9H920 327 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 DEC1Q9P2X7 70 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 FKBP7Q9Y680 259 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 LINC00032P0C843 101 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 PET100P0DJ07 73 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 SLC1A2P43004 574 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 HCAR3P49019 387 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 ANKRD23Q86SG2 305 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 ZZZ3Q8IYH5 903 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 CPSF7Q8N684 471 aaKnown RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 DIRAS2Q96HU8 199 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 DNAJC18Q9H819 358 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 ADGRE2Q9UHX3 823 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 MKLN1Q9UL63 735 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 ZNF490Q9ULM2 529 aaPredicted RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 COL3A1P02461 1466 aaPredicted RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 FER1L6Q2WGJ9 1857 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 NPEPPSL1A6NEC2 478 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 A8MX80 341 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 FAM153BP0C7A2 387 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 ANPEPP15144 967 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 DNAJA1P31689 397 aaKnown RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 MTHFRP42898 656 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 MVKQ03426 396 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 ALG1LQ6GMV1 187 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 GET4Q7L5D6 327 aaPredicted RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 ZFPM1Q8IX07 1006 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 RASGEF1CQ8N431 466 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 ZNF433Q8N7K0 673 aaPredicted RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 FAM84AQ96KN4 292 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 CCDC86Q9H6F5 360 aaKnown RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 RARAP10276 462 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 MAPK12P53778 367 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 CASP9P55211 416 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 SMAD3P84022 425 aaKnown RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 SEC23AQ15436 765 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 DRICH1Q6PGQ1 229 aaPredicted RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 CES3Q6UWW8 571 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 UNC5AQ6ZN44 842 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 OTOP1Q7RTM1 612 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 PCDH20Q8N6Y1 951 aaKnown RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 TMEM161BQ8NDZ6 487 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 SIPA1Q96FS4 1042 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 ZNF717Q9BY31 904 aaPredicted RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 TTYH1Q9H313 450 aaPredicted RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 CUEDC1Q9NWM3 386 aaPredicted RBP8.79□□□□□ -1
SHROOM4-203ENST00000460112 SALL3Q9BXA9 1300 aa8.79□□□□□ -1
SHROOM4-203ENST00000460112 SLC22A1O15245 554 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 DHX15O43143 795 aaKnown RBP8.78□□□□□ -1
SHROOM4-203ENST00000460112 TRMUO75648 421 aaKnown RBP8.78□□□□□ -1
SHROOM4-203ENST00000460112 TPSB2P20231 275 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 SLC12A3P55017 1021 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 TPSAB1Q15661 275 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 SH3RF1Q7Z6J0 888 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 ATAD1Q8NBU5 361 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 PPTC7Q8NI37 304 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 ZNF420Q8TAQ5 688 aaPredicted RBP8.78□□□□□ -1
SHROOM4-203ENST00000460112 SNX15Q9NRS6 342 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 TMEM5Q9Y2B1 443 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 TRPM6Q9BX84 2022 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 BRWD1Q9NSI6 2320 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 A0A1B0GVM2 712 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 TCAF2A6NFQ2 919 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 FADS2O95864 444 aaKnown RBP8.78□□□□□ -1
SHROOM4-203ENST00000460112 AGXTP21549 392 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 ACVR2AP27037 513 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 NDUFS1P28331 727 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 CRHR1P34998 444 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 SP2Q02086 613 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 ITGA7Q13683 1181 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 ZNF234Q14588 700 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 HEPACAMQ14CZ8 416 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 SNAP47Q5SQN1 464 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 C6orf52Q5T4I8 152 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 TMPRSS11BQ86T26 416 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 TIGD4Q8IY51 512 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 PGAM4Q8N0Y7 254 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 CADM2Q8N3J6 435 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 OR2T34Q8NGX1 318 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 OR2T3Q8NH03 318 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 MTMR8Q96EF0 704 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 EPYCQ99645 322 aa8.78□□□□□ -1
SHROOM4-203ENST00000460112 SLC39A3Q9BRY0 314 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms