RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 SNAP47Q5SQN1 464 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 CACHD1Q5VU97 1274 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 LYPLAL1Q5VWZ2 237 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 KIAA1614Q5VZ46 1190 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 DRICH1Q6PGQ1 229 aaPredicted RBP9.78□□□□□ -0.84
HDLBP-228ENST00000459788 BORAQ6PGQ7 559 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 PACS1Q6VY07 963 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 OOSP2Q86WS3 158 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 FAM71DQ8N9W8 422 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 MAIP1Q8WWC4 291 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 CDKN2AIPNLQ96HQ2 116 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 TGM7Q96PF1 710 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 ALS2CR12Q96Q35 445 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 RANBP9Q96S59 729 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 TTC1Q99614 292 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 ARHGAP9Q9BRR9 750 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 MVB12BQ9H7P6 319 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 C10orf88Q9H8K7 445 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 GPN2Q9H9Y4 310 aaPredicted RBP9.78□□□□□ -0.84
HDLBP-228ENST00000459788 PDE7BQ9NP56 450 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 LATS2Q9NRM7 1088 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 STARD5Q9NSY2 213 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 GEMIN8Q9NWZ8 242 aaKnown RBP9.78□□□□□ -0.84
HDLBP-228ENST00000459788 PCDHGA6Q9Y5G7 932 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 PCM1Q15154 2024 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 BSNQ9UPA5 3926 aa9.78□□□□□ -0.84
HDLBP-228ENST00000459788 FLNBO75369 2602 aaKnown RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 HEATR9A2RTY3 570 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 F5H423 210 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 LIN7AO14910 233 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 BUD23O43709 281 aaKnown RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 RASSF9O75901 435 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 METTL18O95568 372 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 FTCDO95954 541 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 PLA2G2AP14555 144 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 LIFP15018 202 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 MC4RP32245 332 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 PPARGP37231 505 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 HSD11B2P80365 405 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 PLCL1Q15111 1095 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 TBR1Q16650 682 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 ZNF658BQ4V348 819 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 FAM182AQ5T1J6 154 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 AADACL2Q6P093 401 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 C6orf15Q6UXA7 325 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 CERS6Q6ZMG9 384 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 FAM83HQ6ZRV2 1179 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 VASH2Q86V25 355 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 PPP1R3BQ86XI6 285 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 SLC13A5Q86YT5 568 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 D2HGDHQ8N465 521 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 ACVR1CQ8NER5 493 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 OR13C4Q8NGS5 318 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 RSC1A1Q92681 617 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 PMEPA1Q969W9 287 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.77□□□□□ -0.852e-6■■■■■ 54.9
HDLBP-228ENST00000459788 C12orf66Q96MD2 445 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 INSM2Q96T92 566 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 APOL2Q9BQE5 337 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 TMEM121Q9BTD3 319 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 WWP1Q9H0M0 922 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 TFB2MQ9H5Q4 396 aaKnown RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 HOMER3Q9NSC5 361 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 KLHL3Q9UH77 587 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 SLC24A2Q9UI40 661 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 KCND3Q9UK17 655 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 DRG1Q9Y295 367 aaKnown RBP9.77□□□□□ -0.85
HDLBP-228ENST00000459788 BTRCQ9Y297 605 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 KCTD3Q9Y597 815 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 CAPN6Q9Y6Q1 641 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 TENM4Q6N022 2769 aa9.77□□□□□ -0.85
HDLBP-228ENST00000459788 C21orf140B9A014 251 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 IFRD1O00458 451 aaPredicted RBP9.76□□□□□ -0.85
HDLBP-228ENST00000459788 GPR39O43194 453 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 LIASO43766 372 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 NRDCO43847 1150 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 KDM1AO60341 852 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 ZBTB11O95625 1053 aaPredicted RBP9.76□□□□□ -0.85
HDLBP-228ENST00000459788 FTH1P02794 183 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 PRB1P04280 392 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 CCNYL3P0C7X3 344 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 ADRA1DP25100 572 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 CA5AP35218 305 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 CCR10P46092 362 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 LEPRP48357 1165 aaKnown RBP9.76□□□□□ -0.85
HDLBP-228ENST00000459788 TUBB4BP68371 445 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 ACVR1Q04771 509 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 FOXM1Q08050 763 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 PRKAA1Q13131 559 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 SEMA5AQ13591 1074 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 TUBB2AQ13885 445 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 LY6DQ14210 128 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 PTPRCAPQ14761 206 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 RPS6KA1Q15418 735 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 CCNG2Q16589 344 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 DNTTIP2Q5QJE6 756 aaKnown RBP9.76□□□□□ -0.85
HDLBP-228ENST00000459788 TMTC4Q5T4D3 741 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 MEI1Q5TIA1 1274 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 ARMC6Q6NXE6 501 aa9.76□□□□□ -0.85
HDLBP-228ENST00000459788 IRGCQ6NXR0 463 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms