RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 TRBV5-4A0A0C4DH59 114 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 AP1G1O43747 822 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 ATG13O75143 517 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 VIMP08670 466 aaKnown RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 ACRV1P26436 265 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 SPRP35270 261 aaPredicted RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 INPP5AQ14642 412 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 ZNF528Q3MIS6 628 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 TMEM259Q4ZIN3 620 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 SETMARQ53H47 684 aaPredicted RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 HECTD2Q5U5R9 776 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 METTL11BQ5VVY1 283 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 NANOGNBQ7Z5D8 188 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 PLD6Q8N2A8 252 aaKnown RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 SPEM1Q8N4L4 309 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 TCF12Q99081 682 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 SLC17A9Q9BYT1 436 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 BTBD1Q9H0C5 482 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 FBRSQ9HAH7 460 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 SARS2Q9NP81 518 aaKnown RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 SNX15Q9NRS6 342 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 DNAAF2Q9NVR5 837 aaKnown RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 USP36Q9P275 1121 aaKnown RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 SCN8AQ9UQD0 1980 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 IQANK1A0A1B0GTG1 560 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 POM121BA6NF01 834 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 OR2AG2A6NM03 316 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 AGAP14A8MT82 685 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 K7ESF4 209 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 KRT37O76014 449 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 FSBPO95073 299 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 SLC25A14O95258 325 aaPredicted RBP10.17□□□□□ -0.78
USP39-210ENST00000459775 BAG2O95816 211 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 OGNP20774 298 aaKnown RBP10.17□□□□□ -0.78
USP39-210ENST00000459775 TYK2P29597 1187 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 GPR1P46091 355 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 ZBTB16Q05516 673 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 IRF4Q15306 451 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 TCEA2Q15560 299 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 FCRLBQ6BAA4 426 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 C16orf46Q6P387 395 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 DOK6Q6PKX4 331 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 TMEM207Q6UWW9 146 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 USP30Q70CQ3 517 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 ARHGAP22Q7Z5H3 698 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 GALNT5Q7Z7M9 940 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 HORMAD1Q86X24 394 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 TMCO5AQ8N6Q1 288 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 TRPC4APQ8TEL6 797 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 GPR22Q99680 433 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 C1QTNF2Q9BXJ5 285 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 VPS11Q9H270 941 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 KCNK9Q9NPC2 374 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 SPATA6Q9NWH7 488 aaPredicted RBP10.17□□□□□ -0.78
USP39-210ENST00000459775 LRRK1Q38SD2 2015 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 ZFHX2Q9C0A1 2572 aaPredicted RBP10.17□□□□□ -0.78
USP39-210ENST00000459775 CACNA1HO95180 2353 aa10.17□□□□□ -0.78
USP39-210ENST00000459775 PSMD11O00231 422 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 SEMA4FO95754 770 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 IDO1P14902 403 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 BRAFP15056 766 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 NFKBIAP25963 317 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 MAOBP27338 520 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 AKT1P31749 480 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 RPA3P35244 121 aaPredicted RBP10.16□□□□□ -0.78
USP39-210ENST00000459775 CXCL12P48061 93 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 TTPAP49638 278 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 CTSCP53634 463 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 RPS21P63220 83 aaKnown RBP10.16□□□□□ -0.78
USP39-210ENST00000459775 IRX4P78413 519 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 CREB5Q02930 508 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 SRSF5Q13243 272 aaKnown RBP10.16□□□□□ -0.78
USP39-210ENST00000459775 SGCGQ13326 291 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 NAB1Q13506 487 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 LRRC14Q15048 493 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 AGBL2Q5U5Z8 902 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 PNCKQ6P2M8 343 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 KIAA0408Q6ZU52 694 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 HEATR4Q86WZ0 1026 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 TRAM1L1Q8N609 369 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 SIDT2Q8NBJ9 832 aaKnown RBP10.16□□□□□ -0.78
USP39-210ENST00000459775 BTN2A2Q8WVV5 523 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 DTNBP1Q96EV8 351 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 CNTNAP3BQ96NU0 1288 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 SELENOSQ9BQE4 189 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 CNTNAP3Q9BZ76 1288 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 P2RY12Q9H244 342 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 SIRT5Q9NXA8 310 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.16□□□□□ -0.78
USP39-210ENST00000459775 SLC17A7Q9P2U7 560 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 FZD4Q9ULV1 537 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 VWA7Q9Y334 891 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 MYO15AQ9UKN7 3530 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 CACNA1AO00555 2505 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 IGHV1OR15-9A0A0B4J2B8 117 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 FAM221BA6H8Z2 402 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 NDUFAB1O14561 156 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 TRIM16O95361 564 aa10.16□□□□□ -0.78
USP39-210ENST00000459775 IGHV4-34P06331 123 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms