RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 INSM2Q96T92 566 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-203ENST00000459756 EIF2B3Q9NR50 452 aaKnown RBP15.76■□□□□ 0.11
COL7A1-203ENST00000459756 FAM8A1Q9UBU6 413 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 SDK2Q58EX2 2172 aa15.76■□□□□ 0.11
COL7A1-203ENST00000459756 CCDC78A2IDD5 438 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 CCDC162PA2VCL2 907 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 ERVH48-1M5A8F1 160 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 TK2O00142 265 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 EFSO43281 561 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 RASSF9O75901 435 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 POLBP06746 335 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 ZSCAN5DPP0CG00 497 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 CXCR5P32302 372 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 GRIA1P42261 906 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 LEPRP48357 1165 aaKnown RBP15.75■□□□□ 0.11
COL7A1-203ENST00000459756 ATP1A2P50993 1020 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 ITIH4Q14624 930 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 PLCL1Q15111 1095 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 DBN1Q16643 649 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 TSTD2Q5T7W7 516 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 CAPRIN2Q6IMN6 1127 aaKnown RBP15.75■□□□□ 0.11
COL7A1-203ENST00000459756 CLDN19Q8N6F1 224 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 SPDYE1Q8NFV5 336 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-203ENST00000459756 PEX13Q92968 403 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL7A1-203ENST00000459756 ZNF768Q9H5H4 540 aaKnown RBP15.75■□□□□ 0.11
COL7A1-203ENST00000459756 SIDT1Q9NXL6 827 aaKnown RBP15.75■□□□□ 0.11
COL7A1-203ENST00000459756 JRKLQ9Y4A0 524 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 HEBP2Q9Y5Z4 205 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 CFAP20Q9Y6A4 193 aaKnown RBP15.75■□□□□ 0.11
COL7A1-203ENST00000459756 COLEC10Q9Y6Z7 277 aa15.75■□□□□ 0.11
COL7A1-203ENST00000459756 KALRNO60229 2985 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 EIF4E1BA6NMX2 242 aaKnown RBP15.74■□□□□ 0.11
COL7A1-203ENST00000459756 QSOX1O00391 747 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 POLR1CO15160 346 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-203ENST00000459756 PRSS56P0CW18 603 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 NDUFS1P28331 727 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 FOXN2P32314 431 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 NSG1P42857 185 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 ACVR1Q04771 509 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 RPA4Q13156 261 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 ZNF658BQ4V348 819 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-203ENST00000459756 LYPLAL1Q5VWZ2 237 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 IRGCQ6NXR0 463 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 ZNF449Q6P9G9 518 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 PACS1Q6VY07 963 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 PPHLN1Q8NEY8 458 aaKnown RBP15.74■□□□□ 0.11
COL7A1-203ENST00000459756 OR13J1Q8NGT2 312 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 NKD1Q969G9 470 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 HDAC10Q969S8 669 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 WBP1Q96G27 269 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 RMDN2Q96LZ7 410 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 TTC1Q99614 292 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 CTRCQ99895 268 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 KIR3DX1Q9H7L2 352 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 COG4Q9H9E3 785 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 SMARCAL1Q9NZC9 954 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 TCAF1Q9Y4C2 921 aa15.74■□□□□ 0.11
COL7A1-203ENST00000459756 OR51F1A6NGY5 319 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 AP3B1O00203 1094 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 KCNJ1P48048 391 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 CD151P48509 253 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 SEPHS1P49903 392 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 KRT33BQ14525 404 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 CACHD1Q5VU97 1274 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 DUS1LQ6P1R4 473 aaKnown RBP15.73■□□□□ 0.11
COL7A1-203ENST00000459756 AFTPHQ6ULP2 937 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 CERS6Q6ZMG9 384 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 FAM92BQ6ZTR7 304 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 MICALCLQ6ZW33 695 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 VASH2Q86V25 355 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 LILRA3Q8N6C8 439 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-203ENST00000459756 PRELID2Q8N945 189 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 ZSCAN1Q8NBB4 408 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 JPH3Q8WXH2 748 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-203ENST00000459756 KLHL6Q8WZ60 621 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 UBXN4Q92575 508 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 PBKQ96KB5 322 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 OR52A5Q9H2C5 316 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 SEMA5BQ9P283 1151 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 SLC2A6Q9UGQ3 507 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 SLC24A2Q9UI40 661 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 PILRAQ9UKJ1 303 aa15.73■□□□□ 0.11
COL7A1-203ENST00000459756 PIKFYVEQ9Y2I7 2098 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 OR5K3A6NET4 321 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 F8W8V4 182 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 IFRD1O00458 451 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-203ENST00000459756 KIF1CO43896 1103 aaKnown RBP15.72■□□□□ 0.11
COL7A1-203ENST00000459756 BASP1P80723 227 aaKnown RBP15.72■□□□□ 0.11
COL7A1-203ENST00000459756 CDK16Q00536 496 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 SRSF6Q13247 344 aaKnown RBP15.72■□□□□ 0.11
COL7A1-203ENST00000459756 IL11RAQ14626 422 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 PCID2Q5JVF3 399 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 OOSP2Q86WS3 158 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 CACNA2D3Q8IZS8 1091 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 IL22RA1Q8N6P7 574 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 OR6P1Q8NGX9 317 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 OR4L1Q8NH43 312 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 SLC39A7Q92504 469 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 SGSM3Q96HU1 749 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms